Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC027279.3-201ENST00000625055 122 ntBASIC1.05□□□□□ -2.24
ATG4BQ9Y4P1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 SNORD63-201ENST00000384262 68 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 POLR2KP2-201ENST00000438155 177 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 COX6CP14-201ENST00000469580 174 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 AC048334.1-201ENST00000477975 159 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 AC010655.3-201ENST00000478818 450 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 AC117454.1-201ENST00000491120 168 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 SNORA70.22-201ENST00000517160 124 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 POLR3GP1-201ENST00000594073 261 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 AL160413.1-201ENST00000622780 310 ntBASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.04□□□□□ -2.24
ATG4BQ9Y4P1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.148-201ENST00000363557 117 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.286-201ENST00000364813 102 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 SNORA25.9-201ENST00000365087 128 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.394-201ENST00000383942 103 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 Y_RNA.460-201ENST00000384255 102 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 RNU6-131P-201ENST00000391144 107 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 MIR1276-201ENST00000408707 83 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 PMCHL1-202ENST00000423102 261 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 SNRPGP10-201ENST00000432323 225 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 RPL39P39-201ENST00000455840 151 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 U8.19-201ENST00000459095 133 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 RNA5SP102-201ENST00000516865 106 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
ATG4BQ9Y4P1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
ATG4BQ9Y4P1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 RNU4-80P-201ENST00000363200 141 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 U8.5-201ENST00000364528 136 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 RNU6-474P-201ENST00000384243 107 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 MIR452-201ENST00000385020 85 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 MIR522-201ENST00000385071 87 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 MIR516B2-201ENST00000385190 85 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 RNU6-910P-201ENST00000390844 107 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 MIR1298-201ENST00000408783 112 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.602-201ENST00000410535 92 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 RNA5SP247-201ENST00000411181 105 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 AC245047.7-201ENST00000440265 293 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 LINC01399-202ENST00000458450 244 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 RPL23AP54-201ENST00000495129 419 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 MTND4P29-201ENST00000503122 1372 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 SEPT14P8-201ENST00000508026 178 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 SNORD45.4-201ENST00000516629 73 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 AC024405.2-202ENST00000532731 184 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 AC136932.1-201ENST00000574771 208 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 SNORD113-5-201ENST00000607261 78 ntBASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ATG4BQ9Y4P1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.61-201ENST00000362835 102 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 SNORD113-8-201ENST00000363497 74 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.645-201ENST00000391229 102 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 RNU6-101P-201ENST00000410323 104 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.631-201ENST00000459607 101 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 SNORD111.1-201ENST00000516421 86 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 RNU7-116P-201ENST00000516940 62 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 MIR4762-201ENST00000585261 75 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 MIR376A1-201ENST00000616574 68 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
ATG4BQ9Y4P1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
ATG4BQ9Y4P1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.28-201ENST00000362554 111 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 U8.7-201ENST00000364940 136 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 snoU2-30.1-201ENST00000365012 70 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.336-201ENST00000365307 109 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 MIR499A-201ENST00000384903 122 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 HMGN1P10-201ENST00000474557 553 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.714-201ENST00000517065 90 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.715-201ENST00000517082 110 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 RNU6-988P-201ENST00000519081 107 ntBASIC1□□□□□ -2.25
ATG4BQ9Y4P1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1□□□□□ -2.25
ATG4BQ9Y4P1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
ATG4BQ9Y4P1 RNU6-1048P-201ENST00000364054 107 ntBASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 SNORD50B-201ENST00000364995 70 ntBASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 Y_RNA.535-201ENST00000384612 99 ntBASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 RNU6-823P-201ENST00000391042 103 ntBASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 RNU7-115P-201ENST00000516433 55 ntBASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.99□□□□□ -2.25
ATG4BQ9Y4P1 MIR4300-201ENST00000581016 96 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms