Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.01□□□□□ -2.09
VPS50Q96JG6 RPL23AP63-201ENST00000498752 471 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 SNORA31.10-201ENST00000516482 106 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 RNU6-453P-201ENST00000516819 85 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 RNA5SP437-201ENST00000517249 129 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VPS50Q96JG6 DEFB122-202ENST00000569013 197 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.01□□□□□ -2.09
VPS50Q96JG6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 MIR7843-201ENST00000622274 79 ntBASIC2.01□□□□□ -2.09
VPS50Q96JG6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VPS50Q96JG6 Y_RNA.203-201ENST00000364106 102 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 SNORA63D-201ENST00000364359 132 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 MT-TT-201ENST00000387460 66 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 MIR526A2-201ENST00000390198 65 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 RNU6-381P-201ENST00000391259 108 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 Y_RNA.793-201ENST00000411222 111 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2□□□□□ -2.09
VPS50Q96JG6 HSPE1P9-201ENST00000440046 311 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
VPS50Q96JG6 MIR4724-201ENST00000579485 89 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 MIR3124-201ENST00000582636 67 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
VPS50Q96JG6 AL773524.1-201ENST00000614065 229 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 AC004792.1-201ENST00000614523 137 ntBASIC2□□□□□ -2.09
VPS50Q96JG6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS50Q96JG6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
VPS50Q96JG6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VPS50Q96JG6 MIR367-201ENST00000362299 68 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 Y_RNA.29-201ENST00000362570 113 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 RNU6-674P-201ENST00000363831 107 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 RNU4-17P-201ENST00000365598 141 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 Y_RNA.785-201ENST00000384290 109 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 RNU2-2P-201ENST00000410396 191 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 RNU2-64P-201ENST00000411315 191 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 AL138752.1-201ENST00000452964 351 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 AC245047.8-201ENST00000456455 284 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS50Q96JG6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS50Q96JG6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
VPS50Q96JG6 Z83818.1-201ENST00000603584 150 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 RNU2-4P-201ENST00000606190 192 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 MIR8054-201ENST00000620877 86 ntBASIC1.99□□□□□ -2.09
VPS50Q96JG6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VPS50Q96JG6 RNU6-1020P-201ENST00000363684 107 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 Y_RNA.796-201ENST00000364268 102 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 RNU4-41P-201ENST00000364426 143 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 Y_RNA.799-201ENST00000364992 102 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 SNORA12.1-201ENST00000390873 148 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 RNU6-440P-201ENST00000390882 105 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 RN7SKP51-201ENST00000410781 304 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS50Q96JG6 RNU7-94P-201ENST00000459576 63 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 U1.36-201ENST00000620684 176 ntBASIC1.98□□□□□ -2.09
VPS50Q96JG6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS50Q96JG6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 MIR520A-201ENST00000384862 85 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 Z98949.2-201ENST00000440996 144 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 AL049830.1-201ENST00000468034 425 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 SNORA31.17-201ENST00000516953 127 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS50Q96JG6 AP002004.2-201ENST00000531656 154 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 AP002392.1-201ENST00000537692 208 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 RPL23AP91-201ENST00000569211 455 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 AL591926.4-201ENST00000616895 298 ntBASIC1.97□□□□□ -2.09
VPS50Q96JG6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VPS50Q96JG6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
VPS50Q96JG6 Y_RNA.571-201ENST00000384753 98 ntBASIC1.96□□□□□ -2.1
VPS50Q96JG6 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
VPS50Q96JG6 PIGPP3-201ENST00000425307 415 ntBASIC1.96□□□□□ -2.1
VPS50Q96JG6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.96□□□□□ -2.1
VPS50Q96JG6 Y_RNA.700-201ENST00000516806 100 ntBASIC1.96□□□□□ -2.1
VPS50Q96JG6 RNU2-56P-201ENST00000516826 190 ntBASIC1.96□□□□□ -2.1
VPS50Q96JG6 MIR3122-201ENST00000577243 73 ntBASIC1.96□□□□□ -2.1
VPS50Q96JG6 MIR4524B-201ENST00000581569 115 ntBASIC1.96□□□□□ -2.1
VPS50Q96JG6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
VPS50Q96JG6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 RNU6-682P-201ENST00000363843 106 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 RNU11-5P-201ENST00000391216 129 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 RNU2-7P-201ENST00000410794 178 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 STAG3L5P-204ENST00000443759 179 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 RNU6-1219P-201ENST00000516143 112 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 RNU6-861P-201ENST00000516745 106 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.95□□□□□ -2.1
VPS50Q96JG6 AL049861.1-201ENST00000603130 150 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 AL021707.8-201ENST00000609428 183 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
VPS50Q96JG6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 323.1 ms