Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 SNORA72-201ENST00000384339 132 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 AL589823.1-201ENST00000429577 183 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
SNF8Q96H20 Z83846.1-201ENST00000446798 265 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 CHEK2P4-201ENST00000450340 246 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.3□□□□□ -2.36
SNF8Q96H20 MIR2355-201ENST00000517199 87 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.3□□□□□ -2.36
SNF8Q96H20 EIF1P4-201ENST00000572664 335 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 AC005899.2-201ENST00000584353 90 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 AL355073.2-201ENST00000612106 557 ntBASIC0.3□□□□□ -2.36
SNF8Q96H20 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.3□□□□□ -2.36
SNF8Q96H20 RNU6-369P-201ENST00000362515 102 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 Y_RNA.122-201ENST00000363331 96 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RNU6-626P-201ENST00000363354 107 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RNU6-20P-201ENST00000384106 107 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 Y_RNA.446-201ENST00000384178 104 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 MIR548F1-201ENST00000408667 84 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 Y_RNA.592-201ENST00000410274 109 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RNU6-613P-201ENST00000410412 108 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 snoU13.21-201ENST00000459368 105 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RNU6-155P-201ENST00000516347 100 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RNU6-720P-201ENST00000516363 108 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 AL355375.2-201ENST00000574825 175 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 AC005176.2-201ENST00000596933 147 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 AC104695.3-201ENST00000604052 296 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 AC090517.2-201ENST00000614966 680 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 AC011476.5-201ENST00000615594 130 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 MIR6515-201ENST00000619843 57 ntBASIC0.29□□□□□ -2.36
SNF8Q96H20 RNY3P11-201ENST00000364153 102 ntBASIC0.28□□□□□ -2.36
SNF8Q96H20 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
SNF8Q96H20 MIR140-201ENST00000385282 100 ntBASIC0.28□□□□□ -2.36
SNF8Q96H20 SNORA69.1-201ENST00000390904 137 ntBASIC0.28□□□□□ -2.36
SNF8Q96H20 RNU6-177P-201ENST00000411257 104 ntBASIC0.28□□□□□ -2.36
SNF8Q96H20 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
SNF8Q96H20 RNU6-718P-201ENST00000516166 105 ntBASIC0.28□□□□□ -2.36
SNF8Q96H20 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SNF8Q96H20 SNORD14E-201ENST00000364009 85 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 RNU6-1156P-201ENST00000410365 100 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 AC015818.7-201ENST00000428754 109 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 AC087499.7-201ENST00000441958 109 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.27□□□□□ -2.37
SNF8Q96H20 FCF1P4-201ENST00000448326 183 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 RNU7-169P-201ENST00000459456 61 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 HMGN1P10-201ENST00000474557 553 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 NDUFA4P2-201ENST00000489989 244 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.27□□□□□ -2.37
SNF8Q96H20 AC116353.2-201ENST00000505332 712 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 MIR2115-201ENST00000516657 100 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SNF8Q96H20 AL669831.3-213ENST00000636676 183 ntBASIC0.27□□□□□ -2.37
SNF8Q96H20 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
SNF8Q96H20 Y_RNA.72-201ENST00000362894 103 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 Y_RNA.146-201ENST00000363549 102 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 Y_RNA.168-201ENST00000363740 102 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 Y_RNA.329-201ENST00000365209 107 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 MIR573-201ENST00000384964 99 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 RNU6-192P-201ENST00000391253 100 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 RNU4-14P-201ENST00000410858 122 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.26□□□□□ -2.37
SNF8Q96H20 RNU6-307P-201ENST00000516743 106 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 Y_RNA.714-201ENST00000517065 90 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 MIR548AO-201ENST00000579992 96 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 AC080013.6-201ENST00000606185 215 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 U4.5-201ENST00000617137 123 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 AC091925.1-201ENST00000623204 462 ntBASIC0.26□□□□□ -2.37
SNF8Q96H20 AL589743.1-201ENST00000551932 2712 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 RNU6-396P-201ENST00000365369 105 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 SNORD38C-201ENST00000384381 69 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 Y_RNA.577-201ENST00000384794 101 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 MIR625-201ENST00000385047 85 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 MIR520H-201ENST00000385126 88 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 U8.17-201ENST00000391292 132 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 RNU6-855P-201ENST00000410395 104 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 SNORD83.1-201ENST00000411362 77 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.25□□□□□ -2.37
SNF8Q96H20 AC069439.1-201ENST00000494739 167 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.25□□□□□ -2.37
SNF8Q96H20 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 RNU7-181P-201ENST00000517234 74 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SNF8Q96H20 SNORD45.3-201ENST00000363836 72 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 Y_RNA.355-201ENST00000365462 98 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 MIR520F-201ENST00000384824 87 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 RNU6-205P-201ENST00000390858 107 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.24□□□□□ -2.37
SNF8Q96H20 SNRPGP14-201ENST00000435400 219 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.24□□□□□ -2.37
SNF8Q96H20 MTND4P17-201ENST00000470444 350 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 RNU6-470P-201ENST00000515954 104 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.24□□□□□ -2.37
SNF8Q96H20 POLR3GP1-201ENST00000594073 261 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 AL162730.1-201ENST00000605734 292 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 Pinc.1-201ENST00000616452 154 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 AC002553.4-201ENST00000616896 331 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 MTND1P7-201ENST00000632801 297 ntBASIC0.24□□□□□ -2.37
SNF8Q96H20 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 379.2 ms