Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 MIR3678-201ENST00000578455 94 ntBASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 NBR2-204ENST00000587322 63 ntBASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 AL162413.1-201ENST00000603198 110 ntBASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 MIR4791-201ENST00000607666 84 ntBASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 Pinc.1-201ENST00000616452 154 ntBASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 MIR2909-201ENST00000617113 69 ntBASIC-0.16□□□□□ -2.44
LRRC39Q96DD0 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 RNU6-842P-201ENST00000384269 107 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 PCNPP3-201ENST00000393579 471 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 RNU7-102P-201ENST00000458948 62 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 RNU2-13P-201ENST00000515909 113 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 SNORA18.4-201ENST00000516440 124 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 AC133485.4-201ENST00000561835 220 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 AC055872.1-201ENST00000570978 278 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 AC005972.2-201ENST00000604690 348 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 MIR6863-201ENST00000636112 90 ntBASIC-0.17□□□□□ -2.44
LRRC39Q96DD0 RNU6-442P-201ENST00000383968 104 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 RNU6-700P-201ENST00000391043 107 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 U8.17-201ENST00000391292 132 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 RNU2-59P-201ENST00000410482 191 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 RNU2-61P-201ENST00000411069 191 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 RNA5SP268-201ENST00000516828 124 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 RNU7-181P-201ENST00000517234 74 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 AC018638.8-201ENST00000588755 281 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 AC006380.1-201ENST00000603598 186 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 AL359880.1-201ENST00000621879 266 ntBASIC-0.18□□□□□ -2.44
LRRC39Q96DD0 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 MTCO3P40-201ENST00000392516 676 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 AL031003.1-201ENST00000404229 172 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 MIR548H2-201ENST00000408874 88 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 RNU7-62P-201ENST00000458856 62 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 AL512360.1-201ENST00000555346 234 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 AC145350.1-201ENST00000567426 208 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 MIR6740-201ENST00000618268 113 ntBASIC-0.19□□□□□ -2.44
LRRC39Q96DD0 SNORA9.1-201ENST00000362412 131 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 RNU6-127P-201ENST00000390897 107 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 RNA5SP496-201ENST00000391240 109 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 RNU6-847P-201ENST00000411115 108 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 USP9YP30-201ENST00000430729 455 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC005042.3-201ENST00000453230 174 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 SNORD5.1-201ENST00000458800 75 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 RPL23AP54-201ENST00000495129 419 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC011352.1-201ENST00000512300 793 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 MIR2355-201ENST00000517199 87 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC105029.1-201ENST00000520250 669 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 MIR4305-201ENST00000583252 102 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 SNORD92-201ENST00000585078 85 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 MIR3942-201ENST00000585264 109 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC121247.2-201ENST00000604776 136 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC005014.2-201ENST00000607795 599 ntBASIC-0.2□□□□□ -2.44
LRRC39Q96DD0 AC010332.2-201ENST00000613083 1904 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 SNORA72.1-201ENST00000363485 129 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 MIR125B2-201ENST00000385128 89 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 RNU6-780P-201ENST00000391030 104 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 MTND3P21-201ENST00000433774 331 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 AC069271.1-201ENST00000445577 156 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 MIR18B-201ENST00000454574 71 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 RNU7-87P-201ENST00000459343 62 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 RNU1-54P-201ENST00000517181 120 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 AC060780.3-201ENST00000589464 80 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 AC124864.2-201ENST00000624736 186 ntBASIC-0.21□□□□□ -2.44
LRRC39Q96DD0 RNU6-268P-201ENST00000364174 107 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 SNORA2A-201ENST00000383885 135 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 MIR145-201ENST00000384967 88 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-747P-201ENST00000390928 104 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-241P-201ENST00000391148 104 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-908P-201ENST00000410160 94 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-447P-201ENST00000410293 104 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-355P-201ENST00000410427 104 ntBASIC-0.22□□□□□ -2.44
LRRC39Q96DD0 RNU6-791P-201ENST00000410467 104 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms