Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNU2-7P-201ENST00000410794 178 ntBASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 RPS12P2-201ENST00000439728 269 ntBASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 STAG3L5P-204ENST00000443759 179 ntBASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 ELOCP29-201ENST00000588193 334 ntBASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
FOXRED1Q96CU9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 MIR539-201ENST00000365690 78 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 SNORD24-201ENST00000383884 75 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AL034345.1-201ENST00000407768 123 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 MIR548I2-201ENST00000408348 149 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AC007064.1-201ENST00000412238 351 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AC087499.2-201ENST00000432861 149 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 RNU7-197P-201ENST00000458836 62 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AC092991.1-201ENST00000477176 376 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 RNA5SP272-201ENST00000516095 111 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 SNORA18.4-201ENST00000516440 124 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 MIR548AI-201ENST00000579940 88 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 MIR4635-201ENST00000583759 79 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AC006386.2-201ENST00000624491 75 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AC012005.1-201ENST00000624575 75 ntBASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
FOXRED1Q96CU9 AC131280.1-202ENST00000624067 4211 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 SNORA63D-201ENST00000364359 132 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 RNU6-1081P-201ENST00000384537 107 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 RNU6-959P-201ENST00000384671 107 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 MIR634-201ENST00000385208 97 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 RNA5SP181-201ENST00000410246 98 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 AC105272.1-201ENST00000438604 198 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 HMGN2P32-201ENST00000444648 269 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 RNVU1-2-201ENST00000516326 135 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 RNU6-62P-201ENST00000516526 102 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 SNORD45.4-201ENST00000516629 73 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 AP001328.1-201ENST00000528550 176 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 EIF4BP1-201ENST00000554881 351 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 AP001340.1-201ENST00000624405 217 ntBASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
FOXRED1Q96CU9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 AL365361.1-201ENST00000566942 3481 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 SNORD50B-201ENST00000364995 70 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 SNORA20-201ENST00000384662 132 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 RNA5SP21-201ENST00000410917 96 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 RNA5SP501-201ENST00000410990 112 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 MTND4LP9-201ENST00000427694 174 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 SNRPGP13-201ENST00000442212 177 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 AL135938.1-201ENST00000443141 297 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 AL365205.2-201ENST00000594586 68 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
FOXRED1Q96CU9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 SNORA3A-201ENST00000364113 130 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 RNU6-460P-201ENST00000391158 108 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 AL138827.1-201ENST00000402666 306 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 RNA5SP127-201ENST00000411051 133 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 RNA5SP481-201ENST00000516814 122 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 SUB1P4-201ENST00000566062 339 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 AC131055.1-201ENST00000584626 316 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 AC011603.4-201ENST00000611325 277 ntBASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
FOXRED1Q96CU9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 RNU6-888P-201ENST00000363010 101 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 Y_RNA.251-201ENST00000364551 99 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 SNORD18B-201ENST00000365659 72 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 SNORD61-201ENST00000384252 73 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 RNU6-163P-201ENST00000384396 106 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 SNORA80E-201ENST00000384744 137 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 MIR9-1-201ENST00000385198 89 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 CYCTP-201ENST00000504253 315 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 RNU6-693P-201ENST00000516134 107 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 SNORA31.10-201ENST00000516482 106 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 SNORA31.25-201ENST00000517242 134 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
FOXRED1Q96CU9 AC006441.5-201ENST00000612680 209 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms