Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRT40Q6A162 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
KRT40Q6A162 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
KRT40Q6A162 Y_RNA.203-201ENST00000364106 102 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 Y_RNA.796-201ENST00000364268 102 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 Y_RNA.799-201ENST00000364992 102 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 Y_RNA.343-201ENST00000365354 112 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 RNU6-768P-201ENST00000384683 107 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 SNORA48.3-201ENST00000391081 134 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 Y_RNA.587-201ENST00000391210 103 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 RNA5SP496-201ENST00000391240 109 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 RNU6-1186P-201ENST00000410429 97 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.48□□□□□ -2.01
KRT40Q6A162 AC009238.1-201ENST00000442165 424 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 AC009237.6-201ENST00000446969 424 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 RNU7-197P-201ENST00000458836 62 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 SNORD11-201ENST00000459124 84 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 RNU6-1053P-201ENST00000515930 101 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 AC011604.1-201ENST00000545978 196 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 MIR548X2-201ENST00000579776 100 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 AL031274.2-201ENST00000599419 203 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 AL049861.1-201ENST00000603130 150 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 U4atac.1-201ENST00000618345 95 ntBASIC2.48□□□□□ -2.01
KRT40Q6A162 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRT40Q6A162 AC100821.1-201ENST00000523153 2479 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 Y_RNA.291-201ENST00000364886 113 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 Y_RNA.337-201ENST00000365312 102 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 RNU1-131P-201ENST00000458943 161 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 SNORA25.12-201ENST00000516202 82 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 RNU6-295P-201ENST00000516901 104 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 RNU6-1096P-201ENST00000517089 102 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.47□□□□□ -2.01
KRT40Q6A162 MIR4498-201ENST00000577599 66 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 MIR6132-201ENST00000622083 109 ntBASIC2.47□□□□□ -2.01
KRT40Q6A162 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.47□□□□□ -2.01
KRT40Q6A162 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KRT40Q6A162 RNU6-1209P-201ENST00000363655 107 ntBASIC2.46□□□□□ -2.02
KRT40Q6A162 RNU6-1164P-201ENST00000364428 107 ntBASIC2.46□□□□□ -2.02
KRT40Q6A162 Y_RNA.355-201ENST00000365462 98 ntBASIC2.46□□□□□ -2.02
KRT40Q6A162 AC245517.4-201ENST00000448601 281 ntBASIC2.46□□□□□ -2.02
KRT40Q6A162 RNU7-99P-201ENST00000516271 62 ntBASIC2.46□□□□□ -2.02
KRT40Q6A162 RPL23AP91-201ENST00000569211 455 ntBASIC2.46□□□□□ -2.02
KRT40Q6A162 AC022513.1-201ENST00000624512 117 ntBASIC2.46□□□□□ -2.02
KRT40Q6A162 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.46□□□□□ -2.02
KRT40Q6A162 SNORA20-201ENST00000384662 132 ntBASIC2.45□□□□□ -2.02
KRT40Q6A162 U8.13-201ENST00000390842 128 ntBASIC2.45□□□□□ -2.02
KRT40Q6A162 EDDM3CP-201ENST00000415977 425 ntBASIC2.45□□□□□ -2.02
KRT40Q6A162 RNU6-1146P-201ENST00000516282 102 ntBASIC2.45□□□□□ -2.02
KRT40Q6A162 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.45□□□□□ -2.02
KRT40Q6A162 MIR3169-201ENST00000578032 83 ntBASIC2.45□□□□□ -2.02
KRT40Q6A162 AC007229.1-201ENST00000590455 412 ntBASIC2.45□□□□□ -2.02
KRT40Q6A162 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
KRT40Q6A162 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
KRT40Q6A162 AC010332.2-201ENST00000613083 1904 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.44□□□□□ -2.02
KRT40Q6A162 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRT40Q6A162 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
KRT40Q6A162 RNU6-1080P-201ENST00000383982 107 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 RNU6-160P-201ENST00000384591 107 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 RNU6-959P-201ENST00000384671 107 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 MIR562-201ENST00000384894 95 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 AL512604.1-201ENST00000404812 257 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 AC099677.2-201ENST00000436385 175 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.44□□□□□ -2.02
KRT40Q6A162 ATP5J2P3-201ENST00000451550 258 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 AC092991.1-201ENST00000477176 376 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 SNORD77.4-201ENST00000516158 81 ntBASIC2.44□□□□□ -2.02
KRT40Q6A162 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.44□□□□□ -2.02
KRT40Q6A162 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
KRT40Q6A162 RNA5SP493-201ENST00000364115 91 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 RNU6-978P-201ENST00000364371 103 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 Y_RNA.393-201ENST00000383936 102 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 MIR520G-201ENST00000385064 90 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 MTND4LP9-201ENST00000427694 174 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 NDUFA4P2-201ENST00000489989 244 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 RNU6-1291P-201ENST00000516591 104 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 RNU6-197P-201ENST00000516680 100 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 AC112693.2-201ENST00000556538 232 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 AC120024.3-201ENST00000603167 156 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 uc_338.4-201ENST00000616635 176 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 AC091895.1-201ENST00000624494 256 ntBASIC2.43□□□□□ -2.02
KRT40Q6A162 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
KRT40Q6A162 Y_RNA.91-201ENST00000363042 107 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 Y_RNA.251-201ENST00000364551 99 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 RNU6-1082P-201ENST00000364574 107 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 RNU6-1336P-201ENST00000383886 109 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 SNORA11.4-201ENST00000408823 129 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 AC108667.1-201ENST00000428618 249 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 RPS26P45-201ENST00000471748 340 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 AL359075.3-201ENST00000613288 217 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 MIR6079-201ENST00000635807 62 ntBASIC2.42□□□□□ -2.02
KRT40Q6A162 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
KRT40Q6A162 Y_RNA.420-201ENST00000384043 110 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 Y_RNA.432-201ENST00000384087 111 ntBASIC2.41□□□□□ -2.02
KRT40Q6A162 RNU6-588P-201ENST00000410281 105 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms