Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 snoU2-30.1-201ENST00000365012 70 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 Y_RNA.370-201ENST00000365589 108 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 RNU6-163P-201ENST00000384396 106 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 MLLT10P1-201ENST00000418346 262 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 MRPS18CP6-201ENST00000423587 223 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 AC005042.3-201ENST00000453230 174 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 ELOCP24-201ENST00000456370 334 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 RNU6-875P-201ENST00000516488 106 ntBASIC0.65□□□□□ -2.31
SCN4AP35499 RNU6-490P-201ENST00000362985 107 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 SNORD115-30-201ENST00000364117 82 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 Y_RNA.274-201ENST00000364714 101 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 Y_RNA.341-201ENST00000365341 102 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 RNU6-442P-201ENST00000383968 104 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR520C-201ENST00000385005 87 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 SNORD78.2-201ENST00000391076 69 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR1185-1-201ENST00000408598 86 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 RNU6-370P-201ENST00000411008 104 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AF228730.4-201ENST00000421457 183 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MTND1P14-201ENST00000427400 950 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AL162725.1-201ENST00000435405 301 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 snoU13.25-201ENST00000458945 104 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 RNU6-917P-201ENST00000516294 104 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 RNU6-63P-201ENST00000516690 95 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.64□□□□□ -2.31
SCN4AP35499 RBM11P1-201ENST00000604951 799 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AC004832.4-201ENST00000608952 331 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR6086-201ENST00000638065 55 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AC005592.1-201ENST00000566527 1640 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SCN4AP35499 Y_RNA.259-201ENST00000364619 101 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AC117470.1-201ENST00000381974 330 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 SNORD38C-201ENST00000384381 69 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR526A1-201ENST00000384897 85 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 SNORA12.1-201ENST00000390873 148 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 RNU6-131P-201ENST00000391144 107 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR1298-201ENST00000408783 112 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MTCO3P10-201ENST00000455912 772 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 HMGN1P10-201ENST00000474557 553 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 SNORA25.10-201ENST00000515926 124 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 SNORA40.14-201ENST00000516543 86 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 RNU6-922P-201ENST00000516753 99 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AC015688.6-201ENST00000577737 104 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR4764-201ENST00000580680 88 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 MIR3192-201ENST00000584920 77 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AC060780.3-201ENST00000589464 80 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 AC005014.2-201ENST00000607795 599 ntBASIC0.64□□□□□ -2.31
SCN4AP35499 SNORA72.1-201ENST00000363485 129 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 Y_RNA.197-201ENST00000364004 102 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 Y_RNA.412-201ENST00000384001 104 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 RNU6-20P-201ENST00000384106 107 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 RNU6-1067P-201ENST00000384752 107 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 AL031003.1-201ENST00000404229 172 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 Y_RNA.605-201ENST00000410577 105 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.63□□□□□ -2.31
SCN4AP35499 RNU2-56P-201ENST00000516826 190 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 MIR548AR-201ENST00000582191 57 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 AC125232.2-201ENST00000592457 143 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 AC040896.1-201ENST00000613819 479 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 AC084781.2-201ENST00000615568 161 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 AL606534.2-204ENST00000635008 178 ntBASIC0.63□□□□□ -2.31
SCN4AP35499 RNU4-73P-201ENST00000363164 141 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 Y_RNA.310-201ENST00000365063 113 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 Y_RNA.329-201ENST00000365209 107 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 Y_RNA.331-201ENST00000365267 102 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 SNORA2.2-201ENST00000365473 135 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 Y_RNA.363-201ENST00000365529 113 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 RNU6-35P-201ENST00000384530 107 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 RNU6-876P-201ENST00000391295 104 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 SNORD99-201ENST00000408612 74 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 MRPS10P1-201ENST00000448483 130 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 AC091951.2-201ENST00000500762 203 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 SNORD111.1-201ENST00000516421 86 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 Y_RNA.691-201ENST00000516611 103 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 BX284668.6-201ENST00000606899 438 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 AC127459.3-201ENST00000624328 466 ntBASIC0.62□□□□□ -2.31
SCN4AP35499 Y_RNA.172-201ENST00000363765 102 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 Y_RNA.222-201ENST00000364264 102 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 U8.19-201ENST00000459095 133 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 RNA5SP255-201ENST00000516370 107 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 RNU7-43P-201ENST00000516554 64 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 AC005176.2-201ENST00000596933 147 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 AC122108.2-201ENST00000611946 526 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SCN4AP35499 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SCN4AP35499 RNU6-1175P-201ENST00000365200 107 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 Y_RNA.336-201ENST00000365307 109 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 SNORA80D-201ENST00000384488 135 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 RNU6-125P-201ENST00000384505 107 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 SNORD89-201ENST00000390981 114 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 SNORD111-201ENST00000408139 94 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 RNU2-70P-201ENST00000410718 179 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 AC063976.4-201ENST00000421971 163 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 MTND1P4-201ENST00000435196 415 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 AC114811.1-201ENST00000507207 168 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 RNU6-1213P-201ENST00000517075 94 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 AL591926.4-201ENST00000616895 298 ntBASIC0.61□□□□□ -2.31
SCN4AP35499 AL138825.1-201ENST00000618587 192 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms