Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR539-201ENST00000365690 78 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RN7SKP101-201ENST00000411376 320 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 AC025647.1-201ENST00000517879 253 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 AP001328.1-201ENST00000528550 176 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 MIR3646-201ENST00000578301 84 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 MIR3117-201ENST00000584034 78 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 TUG1_4.1-201ENST00000619464 181 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.12□□□□□ -2.07
SNHG28P0DPA3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 MIR340-201ENST00000362125 95 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 SNORD114-7-201ENST00000362520 77 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 U8.1-201ENST00000362843 134 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RNU1-105P-201ENST00000363470 161 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AL445687.1-201ENST00000439946 251 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RPS27P1-201ENST00000450552 247 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AL441985.1-201ENST00000457727 251 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RPL23AP54-201ENST00000495129 419 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 PDCD5P2-201ENST00000507570 312 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 MRPS36P2-201ENST00000512569 299 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RNA5SP20-201ENST00000515976 84 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 SNORA70.12-201ENST00000516084 153 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RNU6-965P-201ENST00000516721 96 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AL049861.1-201ENST00000603130 150 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AC005972.2-201ENST00000604690 348 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AC090517.3-201ENST00000625170 141 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 snoZ196.1-201ENST00000625269 89 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-674P-201ENST00000363831 107 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-234P-201ENST00000365229 104 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-597P-201ENST00000365620 102 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 AC245102.2-201ENST00000448956 180 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-437P-201ENST00000459408 95 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 AC010598.1-201ENST00000510378 103 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.712-201ENST00000517011 92 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 MIR378D2-201ENST00000580636 98 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNHG28P0DPA3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RNA5SP432-201ENST00000362480 116 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 SNORA25.7-201ENST00000364375 127 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RNU1-52P-201ENST00000384190 164 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 SNORA75.5-201ENST00000391291 81 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RPL36AP21-201ENST00000490372 323 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RNU6-250P-201ENST00000516958 103 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 MIR3683-201ENST00000580847 82 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AC108081.1-201ENST00000604358 221 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 U7.2-201ENST00000607576 63 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AC084768.2-201ENST00000622736 221 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.09□□□□□ -2.08
SNHG28P0DPA3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 SNORA38-201ENST00000363946 132 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNY3P5-201ENST00000384127 102 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNU6-1064P-201ENST00000410626 104 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MLLT10P1-201ENST00000418346 262 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RPL30P4-201ENST00000429309 333 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RPS4XP11-201ENST00000446897 772 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 HMGN2P18-201ENST00000450680 270 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 AC016925.1-201ENST00000458303 298 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 AC108210.2-201ENST00000503681 201 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNU6-237P-201ENST00000515985 71 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNU6-589P-201ENST00000516485 107 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MIR3121-201ENST00000579680 77 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MIR4765-201ENST00000585007 77 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MIR3914-2-201ENST00000637339 95 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU4-41P-201ENST00000364426 143 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-309P-201ENST00000364573 106 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 SNORA16.1-201ENST00000364597 132 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 SNORD31B-201ENST00000364977 69 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-1144P-201ENST00000384247 104 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-476P-201ENST00000384726 107 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-443P-201ENST00000384780 107 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-772P-201ENST00000516042 105 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-197P-201ENST00000516680 100 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms