Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR539-201ENST00000365690 78 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RN7SKP101-201ENST00000411376 320 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 AC025647.1-201ENST00000517879 253 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 AP001328.1-201ENST00000528550 176 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 MIR3646-201ENST00000578301 84 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 MIR3117-201ENST00000584034 78 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 TUG1_4.1-201ENST00000619464 181 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.12□□□□□ -2.07
SNHG28P0DPA3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.12□□□□□ -2.07
SNHG28P0DPA3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 MIR340-201ENST00000362125 95 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 SNORD114-7-201ENST00000362520 77 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 U8.1-201ENST00000362843 134 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RNU1-105P-201ENST00000363470 161 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AL445687.1-201ENST00000439946 251 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RPS27P1-201ENST00000450552 247 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AL441985.1-201ENST00000457727 251 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RPL23AP54-201ENST00000495129 419 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 PDCD5P2-201ENST00000507570 312 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 MRPS36P2-201ENST00000512569 299 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RNA5SP20-201ENST00000515976 84 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 SNORA70.12-201ENST00000516084 153 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RNU6-965P-201ENST00000516721 96 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AL049861.1-201ENST00000603130 150 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AC005972.2-201ENST00000604690 348 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 AC090517.3-201ENST00000625170 141 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 snoZ196.1-201ENST00000625269 89 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.11□□□□□ -2.07
SNHG28P0DPA3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SNHG28P0DPA3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-674P-201ENST00000363831 107 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-234P-201ENST00000365229 104 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-597P-201ENST00000365620 102 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 AC245102.2-201ENST00000448956 180 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 RNU6-437P-201ENST00000459408 95 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 AC010598.1-201ENST00000510378 103 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 Y_RNA.712-201ENST00000517011 92 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 MIR378D2-201ENST00000580636 98 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
SNHG28P0DPA3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNHG28P0DPA3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RNA5SP432-201ENST00000362480 116 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 SNORA25.7-201ENST00000364375 127 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RNU1-52P-201ENST00000384190 164 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 SNORA75.5-201ENST00000391291 81 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RPL36AP21-201ENST00000490372 323 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 RNU6-250P-201ENST00000516958 103 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 MIR3683-201ENST00000580847 82 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AC108081.1-201ENST00000604358 221 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 U7.2-201ENST00000607576 63 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 AC084768.2-201ENST00000622736 221 ntBASIC2.09□□□□□ -2.07
SNHG28P0DPA3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.09□□□□□ -2.07
SNHG28P0DPA3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.09□□□□□ -2.08
SNHG28P0DPA3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 SNORA38-201ENST00000363946 132 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNY3P5-201ENST00000384127 102 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNU6-1064P-201ENST00000410626 104 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MLLT10P1-201ENST00000418346 262 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RPL30P4-201ENST00000429309 333 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RPS4XP11-201ENST00000446897 772 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 HMGN2P18-201ENST00000450680 270 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 AC016925.1-201ENST00000458303 298 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 AC108210.2-201ENST00000503681 201 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNU6-237P-201ENST00000515985 71 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 RNU6-589P-201ENST00000516485 107 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MIR3121-201ENST00000579680 77 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MIR4765-201ENST00000585007 77 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 MIR3914-2-201ENST00000637339 95 ntBASIC2.08□□□□□ -2.08
SNHG28P0DPA3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNHG28P0DPA3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU4-41P-201ENST00000364426 143 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-309P-201ENST00000364573 106 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 SNORA16.1-201ENST00000364597 132 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 SNORD31B-201ENST00000364977 69 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-1144P-201ENST00000384247 104 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-476P-201ENST00000384726 107 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-443P-201ENST00000384780 107 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-772P-201ENST00000516042 105 ntBASIC2.07□□□□□ -2.08
SNHG28P0DPA3 RNU6-197P-201ENST00000516680 100 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms