Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
SSX4O60224 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.41□□□□□ -2.18
SSX4O60224 MIR548AY-201ENST00000617669 107 ntBASIC1.41□□□□□ -2.18
SSX4O60224 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.41□□□□□ -2.18
SSX4O60224 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
SSX4O60224 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SSX4O60224 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
SSX4O60224 Y_RNA.84-201ENST00000363011 104 ntBASIC1.4□□□□□ -2.19
SSX4O60224 Y_RNA.226-201ENST00000364337 114 ntBASIC1.4□□□□□ -2.19
SSX4O60224 SNORA63C-201ENST00000364578 129 ntBASIC1.4□□□□□ -2.19
SSX4O60224 SNORA72.4-201ENST00000384174 132 ntBASIC1.4□□□□□ -2.19
SSX4O60224 SNX2P2-201ENST00000424553 323 ntBASIC1.4□□□□□ -2.19
SSX4O60224 RNU7-141P-201ENST00000459304 62 ntBASIC1.4□□□□□ -2.19
SSX4O60224 MTATP8P1-201ENST00000467115 207 ntBASIC1.4□□□□□ -2.19
SSX4O60224 AC092991.1-201ENST00000477176 376 ntBASIC1.4□□□□□ -2.19
SSX4O60224 RPL23AP54-201ENST00000495129 419 ntBASIC1.4□□□□□ -2.19
SSX4O60224 AC005840.1-201ENST00000498412 377 ntBASIC1.4□□□□□ -2.19
SSX4O60224 Y_RNA.673-201ENST00000516306 88 ntBASIC1.4□□□□□ -2.19
SSX4O60224 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
SSX4O60224 AC127455.1-201ENST00000565496 145 ntBASIC1.4□□□□□ -2.19
SSX4O60224 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.4□□□□□ -2.19
SSX4O60224 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
SSX4O60224 Y_RNA.16-201ENST00000362421 102 ntBASIC1.39□□□□□ -2.19
SSX4O60224 RNU6-199P-201ENST00000362954 107 ntBASIC1.39□□□□□ -2.19
SSX4O60224 U8.5-201ENST00000364528 136 ntBASIC1.39□□□□□ -2.19
SSX4O60224 RNU6-1065P-201ENST00000384513 106 ntBASIC1.39□□□□□ -2.19
SSX4O60224 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
SSX4O60224 SNORA53-201ENST00000391141 249 ntBASIC1.39□□□□□ -2.19
SSX4O60224 SNORA26.5-201ENST00000391215 123 ntBASIC1.39□□□□□ -2.19
SSX4O60224 MLLT10P1-201ENST00000418346 262 ntBASIC1.39□□□□□ -2.19
SSX4O60224 PIGPP3-201ENST00000425307 415 ntBASIC1.39□□□□□ -2.19
SSX4O60224 U8.19-201ENST00000459095 133 ntBASIC1.39□□□□□ -2.19
SSX4O60224 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
SSX4O60224 MIR4762-201ENST00000585261 75 ntBASIC1.39□□□□□ -2.19
SSX4O60224 AL512605.2-201ENST00000592972 256 ntBASIC1.39□□□□□ -2.19
SSX4O60224 AC120024.3-201ENST00000603167 156 ntBASIC1.39□□□□□ -2.19
SSX4O60224 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
SSX4O60224 AL359821.1-201ENST00000605519 182 ntBASIC1.39□□□□□ -2.19
SSX4O60224 AC134026.1-201ENST00000623249 2239 ntBASIC1.38□□□□□ -2.19
SSX4O60224 SNORA25.1-201ENST00000362326 128 ntBASIC1.38□□□□□ -2.19
SSX4O60224 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
SSX4O60224 RNU6-326P-201ENST00000365480 107 ntBASIC1.38□□□□□ -2.19
SSX4O60224 RNU6-163P-201ENST00000384396 106 ntBASIC1.38□□□□□ -2.19
SSX4O60224 Y_RNA.512-201ENST00000384518 102 ntBASIC1.38□□□□□ -2.19
SSX4O60224 MIR1287-201ENST00000408492 90 ntBASIC1.38□□□□□ -2.19
SSX4O60224 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
SSX4O60224 HMGN1P7-201ENST00000491722 313 ntBASIC1.38□□□□□ -2.19
SSX4O60224 CYCTP-201ENST00000504253 315 ntBASIC1.38□□□□□ -2.19
SSX4O60224 RNU6-635P-201ENST00000516651 102 ntBASIC1.38□□□□□ -2.19
SSX4O60224 RNU6-570P-201ENST00000517051 105 ntBASIC1.38□□□□□ -2.19
SSX4O60224 AC037487.3-201ENST00000606668 112 ntBASIC1.38□□□□□ -2.19
SSX4O60224 AL078604.3-201ENST00000615580 211 ntBASIC1.38□□□□□ -2.19
SSX4O60224 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
SSX4O60224 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.38□□□□□ -2.19
SSX4O60224 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SSX4O60224 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
SSX4O60224 RNU6-833P-201ENST00000363486 107 ntBASIC1.37□□□□□ -2.19
SSX4O60224 Y_RNA.203-201ENST00000364106 102 ntBASIC1.37□□□□□ -2.19
SSX4O60224 MIR522-201ENST00000385071 87 ntBASIC1.37□□□□□ -2.19
SSX4O60224 RNU6-763P-201ENST00000390865 106 ntBASIC1.37□□□□□ -2.19
SSX4O60224 MIR891A-201ENST00000401237 79 ntBASIC1.37□□□□□ -2.19
SSX4O60224 MTCO2P33-201ENST00000402100 465 ntBASIC1.37□□□□□ -2.19
SSX4O60224 SNORA36B-201ENST00000410438 131 ntBASIC1.37□□□□□ -2.19
SSX4O60224 RN7SKP101-201ENST00000411376 320 ntBASIC1.37□□□□□ -2.19
SSX4O60224 SNRPGP10-201ENST00000432323 225 ntBASIC1.37□□□□□ -2.19
SSX4O60224 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.37□□□□□ -2.19
SSX4O60224 MTND4LP30-201ENST00000454092 297 ntBASIC1.37□□□□□ -2.19
SSX4O60224 RPL39P38-201ENST00000467018 153 ntBASIC1.37□□□□□ -2.19
SSX4O60224 AC114811.1-201ENST00000507207 168 ntBASIC1.37□□□□□ -2.19
SSX4O60224 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
SSX4O60224 MIR4255-201ENST00000579351 72 ntBASIC1.37□□□□□ -2.19
SSX4O60224 AC008737.2-201ENST00000599446 118 ntBASIC1.37□□□□□ -2.19
SSX4O60224 BX248123.2-201ENST00000606318 124 ntBASIC1.37□□□□□ -2.19
SSX4O60224 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
SSX4O60224 AC027279.3-201ENST00000625055 122 ntBASIC1.37□□□□□ -2.19
SSX4O60224 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
SSX4O60224 RNY1P10-201ENST00000363268 113 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-238P-201ENST00000363313 106 ntBASIC1.36□□□□□ -2.19
SSX4O60224 Y_RNA.145-201ENST00000363527 102 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-514P-201ENST00000384208 107 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-738P-201ENST00000384531 106 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-713P-201ENST00000384761 107 ntBASIC1.36□□□□□ -2.19
SSX4O60224 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-1203P-201ENST00000410703 110 ntBASIC1.36□□□□□ -2.19
SSX4O60224 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX4O60224 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
SSX4O60224 AC091959.1-201ENST00000495857 238 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-917P-201ENST00000516294 104 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-1338P-201ENST00000516328 91 ntBASIC1.36□□□□□ -2.19
SSX4O60224 RNU6-922P-201ENST00000516753 99 ntBASIC1.36□□□□□ -2.19
SSX4O60224 AL512310.8-201ENST00000550183 120 ntBASIC1.36□□□□□ -2.19
SSX4O60224 AL645939.4-201ENST00000604495 135 ntBASIC1.36□□□□□ -2.19
SSX4O60224 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
SSX4O60224 AL391987.6-201ENST00000305671 199 ntBASIC1.35□□□□□ -2.19
SSX4O60224 RNU6-899P-201ENST00000363947 107 ntBASIC1.35□□□□□ -2.19
SSX4O60224 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
SSX4O60224 RNU6-131P-201ENST00000391144 107 ntBASIC1.35□□□□□ -2.19
SSX4O60224 RNU6-437P-201ENST00000459408 95 ntBASIC1.35□□□□□ -2.19
SSX4O60224 Y_RNA.637-201ENST00000459424 114 ntBASIC1.35□□□□□ -2.19
SSX4O60224 SCARNA24.2-201ENST00000516968 130 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms