Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU6-498P-201ENST00000459468 107 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 AC010531.2-201ENST00000465012 153 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNU7-116P-201ENST00000516940 62 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 AC015720.1-201ENST00000565251 277 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 AL031274.2-201ENST00000599419 203 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SMAD6O43541 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SMAD6O43541 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
SMAD6O43541 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMAD6O43541 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMAD6O43541 RNY1P11-201ENST00000363759 113 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 RNU6-743P-201ENST00000364151 106 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 Y_RNA.218-201ENST00000364218 104 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 RNU6-117P-201ENST00000365415 107 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 Y_RNA.521-201ENST00000384560 114 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 RNU6-136P-201ENST00000384663 107 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 RNU2-32P-201ENST00000411193 191 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 AL353689.1-201ENST00000438895 199 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 AC008267.6-201ENST00000441664 139 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 AC092991.1-201ENST00000477176 376 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 RPS27P22-201ENST00000478056 241 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 RNA5SP490-201ENST00000517141 136 ntBASIC2.03□□□□□ -2.08
SMAD6O43541 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SMAD6O43541 RNU1-23P-201ENST00000363361 144 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 SNORD45.3-201ENST00000363836 72 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 RNU6-1240P-201ENST00000365155 104 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 RNU6-546P-201ENST00000383991 107 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 RNY3P5-201ENST00000384127 102 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 RNU6-460P-201ENST00000391158 108 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 Y_RNA.587-201ENST00000391210 103 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 RNU4-43P-201ENST00000410628 137 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 CYCSP49-201ENST00000420810 319 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 AC008134.1-201ENST00000420943 193 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.02□□□□□ -2.09
SMAD6O43541 SNRPGP8-201ENST00000454064 226 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 RNU6-1211P-201ENST00000459179 105 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.02□□□□□ -2.09
SMAD6O43541 MIR6715A-201ENST00000615929 79 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 AC006435.5-201ENST00000624486 112 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 MIR6844-201ENST00000637122 62 ntBASIC2.02□□□□□ -2.09
SMAD6O43541 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SMAD6O43541 Y_RNA.71-201ENST00000362892 104 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 Y_RNA.81-201ENST00000362997 102 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 Y_RNA.127-201ENST00000363386 109 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RNU6-674P-201ENST00000363831 107 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RNU4-13P-201ENST00000364019 141 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RNU4-41P-201ENST00000364426 143 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.01□□□□□ -2.09
SMAD6O43541 Y_RNA.393-201ENST00000383936 102 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RNU6-588P-201ENST00000410281 105 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RN7SKP101-201ENST00000411376 320 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 MTCO1P44-201ENST00000441935 243 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RPS27P1-201ENST00000450552 247 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RNU6-1333P-201ENST00000516162 93 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 RNU6-1234P-201ENST00000516877 103 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 MIR3646-201ENST00000578301 84 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 AL929325.1-201ENST00000603096 117 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.01□□□□□ -2.09
SMAD6O43541 AL021707.8-201ENST00000609428 183 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 AC092881.1-201ENST00000638218 2733 ntBASIC2.01□□□□□ -2.09
SMAD6O43541 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SMAD6O43541 RNU1-22P-201ENST00000363334 158 ntBASIC2□□□□□ -2.09
SMAD6O43541 RNA5SP205-201ENST00000364653 136 ntBASIC2□□□□□ -2.09
SMAD6O43541 RNA5SP496-201ENST00000391240 109 ntBASIC2□□□□□ -2.09
SMAD6O43541 HMGN2P39-201ENST00000398005 273 ntBASIC2□□□□□ -2.09
SMAD6O43541 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2□□□□□ -2.09
SMAD6O43541 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
SMAD6O43541 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
SMAD6O43541 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2□□□□□ -2.09
SMAD6O43541 RNU6-991P-201ENST00000516168 107 ntBASIC2□□□□□ -2.09
SMAD6O43541 RNU2-34P-201ENST00000516534 121 ntBASIC2□□□□□ -2.09
SMAD6O43541 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2□□□□□ -2.09
SMAD6O43541 MIR4438-201ENST00000585271 93 ntBASIC2□□□□□ -2.09
SMAD6O43541 AL049861.1-201ENST00000603130 150 ntBASIC2□□□□□ -2.09
SMAD6O43541 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SMAD6O43541 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMAD6O43541 RNA5SP276-201ENST00000362580 94 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 RNU6-1082P-201ENST00000364574 107 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 MIR539-201ENST00000365690 78 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 SNORD116-14-201ENST00000383894 92 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 SNORD116-17-201ENST00000383929 92 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 SNORA72-201ENST00000384339 132 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 SNORD116-15-201ENST00000384445 92 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 SNORD116-19-201ENST00000384729 92 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 MIR95-201ENST00000385072 81 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 Y_RNA.629-201ENST00000411368 105 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 AL161788.1-201ENST00000441805 169 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 RPS4XP11-201ENST00000446897 772 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.99□□□□□ -2.09
SMAD6O43541 AC097462.1-201ENST00000514125 324 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.99□□□□□ -2.09
SMAD6O43541 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 AC120024.3-201ENST00000603167 156 ntBASIC1.99□□□□□ -2.09
SMAD6O43541 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 280.7 ms