Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 ACA59.1-201ENST00000515966 143 ntBASIC-0.71□□□□□ -2.52
HMGB3O15347 RNU6-504P-201ENST00000516568 104 ntBASIC-0.71□□□□□ -2.52
HMGB3O15347 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.71□□□□□ -2.52
HMGB3O15347 AC121247.2-201ENST00000604776 136 ntBASIC-0.71□□□□□ -2.52
HMGB3O15347 FGF7P2-201ENST00000332473 296 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 RNA5SP457-201ENST00000363657 124 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 RNU6-268P-201ENST00000364174 107 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 RNU6-442P-201ENST00000383968 104 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 SNORA8.3-201ENST00000384679 139 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 MIR489-201ENST00000384923 84 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 MIR518F-201ENST00000384973 87 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 MIR620-201ENST00000385232 95 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 MCFD2P1-201ENST00000417812 300 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 MTND1P11-201ENST00000456661 876 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 RNA5SP401-201ENST00000515920 127 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 RNU6-135P-201ENST00000516769 101 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 AC087685.1-201ENST00000587507 141 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 AL355297.3-201ENST00000604082 446 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 AC011921.3-201ENST00000605540 361 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 AC099654.12-201ENST00000639868 649 ntBASIC-0.72□□□□□ -2.52
HMGB3O15347 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 SNORD115-30-201ENST00000364117 82 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 RNU4-20P-201ENST00000365601 151 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 SNORA72-201ENST00000384339 132 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 MIR588-201ENST00000384900 83 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
HMGB3O15347 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.73□□□□□ -2.53
HMGB3O15347 AP001180.6-201ENST00000584918 159 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 AC005972.2-201ENST00000604690 348 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 AC092954.2-201ENST00000609103 430 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 AP002371.2-201ENST00000624450 503 ntBASIC-0.73□□□□□ -2.53
HMGB3O15347 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 SNORA24-201ENST00000384096 131 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 SNORD38B-201ENST00000384690 67 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 RNU6-95P-201ENST00000384697 107 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 MIR563-201ENST00000385080 79 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 MTCO2P4-201ENST00000517968 247 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.74□□□□□ -2.53
HMGB3O15347 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.74□□□□□ -2.53
HMGB3O15347 MIR4752-201ENST00000579672 72 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 MIR8066-201ENST00000617280 78 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 MIR6759-201ENST00000638110 65 ntBASIC-0.74□□□□□ -2.53
HMGB3O15347 RNU6-254P-201ENST00000363377 107 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 SNORD28-201ENST00000384706 75 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 MIR517A-201ENST00000385001 87 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 SNORD37.1-201ENST00000390968 65 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 SNORA75.4-201ENST00000391278 119 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 MTND2P18-201ENST00000419962 1030 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 snoU13.2-201ENST00000459201 104 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 RNU6-625P-201ENST00000459412 107 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 RNA5SP285-201ENST00000516619 119 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 AC106754.1-201ENST00000562632 1513 ntBASIC-0.75□□□□□ -2.53
HMGB3O15347 MIR101-1-201ENST00000362265 75 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 RNU6-595P-201ENST00000363944 107 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 MT-TF-201ENST00000387314 71 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 MIR501-201ENST00000390204 84 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 RNA5SP451-201ENST00000410588 110 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 AL353193.1-201ENST00000421444 268 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 MTCO2P19-201ENST00000427513 598 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.76□□□□□ -2.53
HMGB3O15347 RPS29P8-201ENST00000445109 171 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 MTND4P19-201ENST00000446659 478 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 RNU2-12P-201ENST00000517216 168 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 MIR548AD-201ENST00000584780 82 ntBASIC-0.76□□□□□ -2.53
HMGB3O15347 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.77□□□□□ -2.53
HMGB3O15347 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 MTATP6P13-201ENST00000438531 667 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 AC026782.1-201ENST00000512952 449 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 MTND1P24-201ENST00000552175 861 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 MIR4639-201ENST00000584938 69 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 AC096720.1-201ENST00000604441 183 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 AC109347.2-201ENST00000610220 349 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 MIR8055-201ENST00000610739 97 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.77□□□□□ -2.53
HMGB3O15347 MIR30D-201ENST00000362283 70 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 RNY1P16-201ENST00000363063 111 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 RNU6-553P-201ENST00000364047 96 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 RNU6-740P-201ENST00000364734 105 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 SNORA72.3-201ENST00000365074 132 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 AC236972.2-201ENST00000434979 310 ntBASIC-0.78□□□□□ -2.53
HMGB3O15347 SNORD11.1-201ENST00000459482 85 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 238 ms