Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR520G-201ENST00000385064 90 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AC104332.1-201ENST00000440471 797 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 RPS20P10-201ENST00000451209 253 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AC005042.3-201ENST00000453230 174 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 SNORA70.12-201ENST00000516084 153 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AL162424.1-201ENST00000602325 221 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AL591926.4-201ENST00000616895 298 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 SNORD114-7-201ENST00000362520 77 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.105-201ENST00000363182 111 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 RNU6-1048P-201ENST00000364054 107 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 SNORA22B-201ENST00000383876 138 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 RNU6-1065P-201ENST00000384513 106 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.551-201ENST00000384661 102 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.602-201ENST00000410535 92 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 RNA5SP436-201ENST00000516020 115 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 RNU6-947P-201ENST00000516264 106 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 RNU6-1153P-201ENST00000516760 105 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 RN7SKP88-201ENST00000516847 250 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 MIR3664-201ENST00000579074 99 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 7SK.8-201ENST00000612110 250 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 7SK.11-201ENST00000615477 250 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 7SK.13-201ENST00000622040 250 ntBASIC0.93□□□□□ -2.26
NKX2-6A6NCS4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.28-201ENST00000362554 111 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 RNU6-199P-201ENST00000362954 107 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 RNU4-50P-201ENST00000364361 141 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.341-201ENST00000365341 102 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.389-201ENST00000383924 113 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.460-201ENST00000384255 102 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.462-201ENST00000384268 102 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 RNU6-102P-201ENST00000384485 104 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 RNU6-823P-201ENST00000391042 103 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 RNA5SP482-201ENST00000391269 118 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 MTCO2P12-201ENST00000427426 682 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 AC117454.1-201ENST00000491120 168 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 AC114811.1-201ENST00000507207 168 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 AC005972.2-201ENST00000604690 348 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 RAC1P9-201ENST00000604990 392 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 AL138825.1-201ENST00000618587 192 ntBASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.92□□□□□ -2.26
NKX2-6A6NCS4 SNORD33-201ENST00000362761 85 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 RNU4-80P-201ENST00000363200 141 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 U8.7-201ENST00000364940 136 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.310-201ENST00000365063 113 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.383-201ENST00000383855 97 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 RNU6-163P-201ENST00000384396 106 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.527-201ENST00000384573 102 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 RNU6-21P-201ENST00000384710 107 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 MIR526A1-201ENST00000384897 85 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 SNORD41-201ENST00000386967 70 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 RNU2-14P-201ENST00000411053 191 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.631-201ENST00000459607 101 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 RPL39P38-201ENST00000467018 153 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 AC098869.1-201ENST00000481627 292 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 AL133373.1-201ENST00000497098 94 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 RNU7-28P-201ENST00000516759 62 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 RNU6-897P-201ENST00000517135 105 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 MIR6779-201ENST00000617283 64 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 AC134026.1-201ENST00000623249 2239 ntBASIC0.91□□□□□ -2.26
NKX2-6A6NCS4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.26-201ENST00000362539 101 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 RNU6-797P-201ENST00000363101 109 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 SNORD113-8-201ENST00000363497 74 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 SNORD114-26-201ENST00000363543 72 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.253-201ENST00000364562 112 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 RNU6-806P-201ENST00000365147 105 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 SNORD63-201ENST00000384262 68 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 RNU6-342P-201ENST00000384521 104 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 MIR562-201ENST00000384894 95 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 RNU11-5P-201ENST00000391216 129 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 MIR1278-201ENST00000408753 81 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 AL390729.2-201ENST00000416137 156 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.715-201ENST00000517082 110 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 MIR3171-201ENST00000584270 74 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
NKX2-6A6NCS4 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 Y_RNA.128-201ENST00000363391 112 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 MIR516B2-201ENST00000385190 85 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 RNU6-121P-201ENST00000410525 99 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 RPL30P7-201ENST00000479312 323 ntBASIC0.89□□□□□ -2.27
NKX2-6A6NCS4 RNU6-475P-201ENST00000516073 104 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms