Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
U2surpQ6NV83 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.61■□□□□ 0.89
U2surpQ6NV83 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
U2surpQ6NV83 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44357-201ENSMUST00000195897 142 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm19658-201ENSMUST00000196231 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44367-201ENSMUST00000196836 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44350-201ENSMUST00000197197 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44390-201ENSMUST00000197533 144 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44313-201ENSMUST00000198018 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44486-201ENSMUST00000198508 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44314-201ENSMUST00000199263 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44394-201ENSMUST00000199558 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44484-201ENSMUST00000199873 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44466-201ENSMUST00000200264 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Gm44359-201ENSMUST00000200671 138 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Mzt1-203ENSMUST00000227948 952 ntBASIC20.6■□□□□ 0.89
U2surpQ6NV83 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
U2surpQ6NV83 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.59■□□□□ 0.89
U2surpQ6NV83 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
U2surpQ6NV83 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.59■□□□□ 0.89
U2surpQ6NV83 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
U2surpQ6NV83 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
U2surpQ6NV83 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
U2surpQ6NV83 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2surpQ6NV83 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
U2surpQ6NV83 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
U2surpQ6NV83 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Gm25406-201ENSMUST00000157599 105 ntBASIC20.57■□□□□ 0.88
U2surpQ6NV83 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.57■□□□□ 0.88
U2surpQ6NV83 Mir6404-201ENSMUST00000183699 94 ntBASIC20.57■□□□□ 0.88
U2surpQ6NV83 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms