Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm7977-201ENSMUST00000193787 748 ntBASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1aP25118 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Gm21559-201ENSMUST00000220638 855 ntBASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Gm8587-201ENSMUST00000076538 843 ntBASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf1aP25118 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Tnfrsf1aP25118 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Gm36967-201ENSMUST00000193814 266 ntBASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf1aP25118 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf1aP25118 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms