Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 MIR126-201ENST00000362291 85 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-1072P-201ENST00000384703 107 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-443P-201ENST00000384780 107 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 MIR29C-201ENST00000385231 88 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 MIR802-201ENST00000390235 94 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 SNORD72-201ENST00000390994 80 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 RNA5SP467-201ENST00000391274 118 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 SNRPGP13-201ENST00000442212 177 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 AP002004.2-201ENST00000531656 154 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 ZNF271P-202ENST00000465539 1970 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 MTND5P18-201ENST00000445624 1801 ntBASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
TRIM56Q9BRZ2 FAM35CP-201ENST00000554755 2470 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-1164P-201ENST00000364428 107 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 SNORD15B-201ENST00000384714 146 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 RNA5SP344-201ENST00000411081 104 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 AP004217.1-201ENST00000480579 346 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 RNU6-693P-201ENST00000516134 107 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 RNA5SP236-201ENST00000516169 116 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 AC022217.4-201ENST00000604389 163 ntBASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM56Q9BRZ2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 MIR181B1-201ENST00000385240 110 ntBASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 MIR1262-201ENST00000408276 93 ntBASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 RN7SL633P-201ENST00000488974 297 ntBASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 EIF4BP1-201ENST00000554881 351 ntBASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM56Q9BRZ2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 SNORD114-6-201ENST00000364393 72 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 MIR548A1-201ENST00000385041 97 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 AL117342.1-201ENST00000404861 406 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 RNA5SP136-201ENST00000410906 107 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 AC007064.1-201ENST00000412238 351 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 UBE2DNL-203ENST00000474922 222 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 Y_RNA.666-201ENST00000516187 112 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-412P-201ENST00000516434 106 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 AL162274.2-201ENST00000614406 332 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 AL591926.4-201ENST00000616895 298 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 AC006386.2-201ENST00000624491 75 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 AC012005.1-201ENST00000624575 75 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 AC008555.8-201ENST00000623602 2168 ntBASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM56Q9BRZ2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 SNORA8-201ENST00000384574 139 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 FTH1P12-201ENST00000432137 551 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 AL049830.1-201ENST00000468034 425 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 AC008885.1-201ENST00000514930 301 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-1149P-201ENST00000516810 97 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 MIR4513-201ENST00000581077 86 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 U6.108-201ENST00000637764 58 ntBASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM56Q9BRZ2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3□□□□□ -1.93
TRIM56Q9BRZ2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3□□□□□ -1.93
TRIM56Q9BRZ2 MIR22-201ENST00000362190 85 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 MIR1263-201ENST00000408324 86 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 SNORA11.4-201ENST00000408823 129 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 RPS29P6-201ENST00000438196 145 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 AL031737.1-201ENST00000450125 223 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3□□□□□ -1.93
TRIM56Q9BRZ2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-168P-201ENST00000516189 101 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 RNA5SP341-201ENST00000516261 117 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 AC091544.4-201ENST00000555268 342 ntBASIC3□□□□□ -1.93
TRIM56Q9BRZ2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM56Q9BRZ2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 SNORA1B-201ENST00000362535 133 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-1255P-201ENST00000363434 112 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 RNA5SP493-201ENST00000364115 91 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 Y_RNA.528-201ENST00000384575 108 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 MIR548A2-201ENST00000384956 97 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 MIR522-201ENST00000385071 87 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 SNORD77.3-201ENST00000391113 65 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 AC009487.2-201ENST00000420969 6821 ntBASIC2.99□□□□□ -1.93
TRIM56Q9BRZ2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms