Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.15□□□□□ -2.23
PTPN4P29074 MTND4P29-201ENST00000503122 1372 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 Y_RNA.172-201ENST00000363765 102 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 Y_RNA.813-201ENST00000364639 102 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 Y_RNA.445-201ENST00000384168 102 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 RNU6-424P-201ENST00000384367 105 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 Y_RNA.535-201ENST00000384612 99 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 Y_RNA.604-201ENST00000410574 102 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 PMCHL1-202ENST00000423102 261 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 CALM2P4-201ENST00000430810 426 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 AC005042.3-201ENST00000453230 174 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 AC233266.1-201ENST00000454518 96 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 U8.20-201ENST00000459445 131 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.14□□□□□ -2.23
PTPN4P29074 RNA5SP168-201ENST00000516642 112 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 AC040926.1-201ENST00000530195 238 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 AC242852.1-201ENST00000612151 96 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 AC244015.1-201ENST00000622301 99 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 AC005592.1-201ENST00000566527 1640 ntBASIC1.14□□□□□ -2.23
PTPN4P29074 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
PTPN4P29074 RNU6-199P-201ENST00000362954 107 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 RNU4-50P-201ENST00000364361 141 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 Y_RNA.329-201ENST00000365209 107 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 SNORD14.1-201ENST00000365609 90 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 Y_RNA.394-201ENST00000383942 103 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 Y_RNA.439-201ENST00000384119 94 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 Y_RNA.460-201ENST00000384255 102 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 U8.16-201ENST00000391279 133 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 AL390729.2-201ENST00000416137 156 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 RPS4XP11-201ENST00000446897 772 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 snoU13.18-201ENST00000459483 104 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 SNORA4-201ENST00000584302 138 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 AL357312.1-201ENST00000603879 298 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 AC004832.4-201ENST00000608952 331 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 PART1_1.1-201ENST00000611761 217 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 AC090574.1-201ENST00000623186 233 ntBASIC1.13□□□□□ -2.23
PTPN4P29074 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PTPN4P29074 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PTPN4P29074 MIR96-201ENST00000362288 78 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 Y_RNA.331-201ENST00000365267 102 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 RNU6-474P-201ENST00000384243 107 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 SNORD63-201ENST00000384262 68 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 Y_RNA.471-201ENST00000384312 102 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 Y_RNA.551-201ENST00000384661 102 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 RNU6-130P-201ENST00000411112 103 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 Z98949.2-201ENST00000440996 144 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.12□□□□□ -2.23
PTPN4P29074 AL049830.1-201ENST00000468034 425 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 AC092991.1-201ENST00000477176 376 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 Y_RNA.713-201ENST00000517013 96 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 MIR4778-201ENST00000577635 80 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.12□□□□□ -2.23
PTPN4P29074 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.12□□□□□ -2.23
PTPN4P29074 GHRLOS.1-201ENST00000610995 70 ntBASIC1.12□□□□□ -2.23
PTPN4P29074 MIRLET7C-201ENST00000362160 84 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 SNORD81.1-201ENST00000363064 77 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 Y_RNA.143-201ENST00000363520 106 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 Y_RNA.148-201ENST00000363557 117 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 RNU4-41P-201ENST00000364426 143 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 RNU6-937P-201ENST00000384325 106 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 Y_RNA.645-201ENST00000391229 102 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 U8.19-201ENST00000459095 133 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 SNORA25.10-201ENST00000515926 124 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 RNU7-110P-201ENST00000516891 62 ntBASIC1.11□□□□□ -2.23
PTPN4P29074 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.11□□□□□ -2.23
PTPN4P29074 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
PTPN4P29074 Y_RNA.28-201ENST00000362554 111 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 SNORA2.2-201ENST00000365473 135 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 RNU6-1080P-201ENST00000383982 107 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AL451046.2-201ENST00000403074 277 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 RPS20P10-201ENST00000451209 253 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AC010655.3-201ENST00000478818 450 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.1□□□□□ -2.23
PTPN4P29074 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AC090049.2-201ENST00000550377 109 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AL078603.1-201ENST00000603824 313 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AC011373.1-201ENST00000607270 237 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 AC106754.2-201ENST00000623006 233 ntBASIC1.1□□□□□ -2.23
PTPN4P29074 Y_RNA.138-201ENST00000363462 102 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 Y_RNA.424-201ENST00000384063 103 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 MIR653-201ENST00000385279 96 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 RNU4-30P-201ENST00000410245 143 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 RNU6-710P-201ENST00000410424 105 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.09□□□□□ -2.23
PTPN4P29074 RPL39P39-201ENST00000455840 151 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 Y_RNA.631-201ENST00000459607 101 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 RNA5SP220-201ENST00000516298 104 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
PTPN4P29074 AC011604.1-201ENST00000545978 196 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms