Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SEPT14P24-201ENST00000447236 180 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AL031274.1-201ENST00000450334 232 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.75□□□□□ -2.53
SPTA1P02549 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.75□□□□□ -2.53
SPTA1P02549 AC010655.3-201ENST00000478818 450 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 SNORD22.1-201ENST00000516331 125 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 RNU6-881P-201ENST00000516813 102 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 SNORA25.17-201ENST00000517184 124 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AC026421.1-201ENST00000519101 163 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 MIR3179-1-201ENST00000578940 84 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 MIR3179-2-201ENST00000579107 84 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 MIR3179-3-201ENST00000579566 84 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.75□□□□□ -2.53
SPTA1P02549 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 MIR3179-4-201ENST00000617599 84 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AC005562.2-201ENST00000618264 111 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AL596211.1-201ENST00000569873 2277 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 RNU6-407P-201ENST00000365280 104 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 RNU6-855P-201ENST00000410395 104 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.75□□□□□ -2.53
SPTA1P02549 AC104576.1-201ENST00000524225 88 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AP003733.2-201ENST00000529409 171 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 AL157687.1-201ENST00000554853 619 ntBASIC-0.75□□□□□ -2.53
SPTA1P02549 ZNF299P-201ENST00000406845 1804 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.76□□□□□ -2.53
SPTA1P02549 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.76□□□□□ -2.53
SPTA1P02549 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.76□□□□□ -2.53
SPTA1P02549 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.76□□□□□ -2.53
SPTA1P02549 UQCRBP2-201ENST00000447827 297 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 SUMO1P2-201ENST00000452524 304 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 AC105417.1-201ENST00000514691 285 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.76□□□□□ -2.53
SPTA1P02549 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 AC026470.2-201ENST00000561492 181 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 MIR4499-201ENST00000584834 69 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 RNU6-702P-201ENST00000364982 107 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 RNU6-847P-201ENST00000411115 108 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 AL158053.1-201ENST00000441503 453 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.76□□□□□ -2.53
SPTA1P02549 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 RNU6-323P-201ENST00000521915 107 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 MIR4676-201ENST00000583078 72 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 AC002044.1-201ENST00000606707 158 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 MIR6851-201ENST00000617060 67 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 AC093726.3-201ENST00000637588 150 ntBASIC-0.76□□□□□ -2.53
SPTA1P02549 SNORA63C-201ENST00000364578 129 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MIR522-201ENST00000385071 87 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.77□□□□□ -2.53
SPTA1P02549 MIR876-201ENST00000401147 81 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MTND1P11-201ENST00000456661 876 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.77□□□□□ -2.53
SPTA1P02549 RNU6-732P-201ENST00000516033 103 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MIR3118-1-201ENST00000581787 76 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MIR4280-201ENST00000582178 76 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 POLR3GP1-201ENST00000594073 261 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 AP002802.2-201ENST00000605877 235 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 AC074085.1-201ENST00000413598 418 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 PRDX4P1-201ENST00000507189 574 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MTCO3P42-201ENST00000509488 518 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MTCO3P39-201ENST00000514812 518 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 SNORD27.1-201ENST00000516319 72 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 RNU6-706P-201ENST00000517229 104 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MTND1P5-201ENST00000517906 940 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 AC104072.1-201ENST00000568817 668 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 MIR6507-201ENST00000613630 70 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 AL078596.1-201ENST00000624856 447 ntBASIC-0.77□□□□□ -2.53
SPTA1P02549 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.77□□□□□ -2.53
SPTA1P02549 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 RNU6-428P-201ENST00000362942 107 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 RNU4-1-201ENST00000363925 141 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 RNU6-901P-201ENST00000384593 106 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
SPTA1P02549 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
SPTA1P02549 ZNF114P1-201ENST00000453500 292 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 AC013437.2-201ENST00000639587 677 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 SNORA13-201ENST00000458790 133 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 RNA5SP470-201ENST00000516463 106 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 RNY4-201ENST00000516507 96 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 AC131235.4-201ENST00000609288 620 ntBASIC-0.78□□□□□ -2.53
SPTA1P02549 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 RNU6-431P-201ENST00000383874 107 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 RNU6-207P-201ENST00000384137 107 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 MIR617-201ENST00000385030 97 ntBASIC-0.79□□□□□ -2.54
SPTA1P02549 MIR517B-201ENST00000385102 67 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms