Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.354-201ENST00000365448 111 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.361-201ENST00000365515 120 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.471-201ENST00000384312 102 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.570-201ENST00000384750 101 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.645-201ENST00000391229 102 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.604-201ENST00000410574 102 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 AC022028.1-201ENST00000412054 408 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 MTND4P19-201ENST00000446659 478 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 SNORA25.10-201ENST00000515926 124 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 RNU6-397P-201ENST00000516226 104 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1046P-201ENST00000516538 107 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 RNU6-113P-201ENST00000516653 101 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 RNU6-902P-201ENST00000517212 91 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 RN7SKP295-201ENST00000517264 153 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 AC040926.1-201ENST00000530195 238 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 CYP3A52P-201ENST00000563326 91 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 DEFB117-201ENST00000602356 141 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 AC073349.3-201ENST00000617616 186 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 AC090971.5-201ENST00000621102 293 ntBASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
NKX2-6A6NCS4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 RNU6-1123P-201ENST00000362347 106 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.61-201ENST00000362835 102 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.286-201ENST00000364813 102 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 SNORA25.8-201ENST00000364831 128 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.331-201ENST00000365267 102 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.395-201ENST00000383945 109 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.445-201ENST00000384168 102 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 MIR618-201ENST00000385287 98 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 AL590004.1-201ENST00000405321 300 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 RNU2-61P-201ENST00000411069 191 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 AL162725.1-201ENST00000435405 301 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 HSPE1P13-201ENST00000451143 297 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 RNU7-12P-201ENST00000516030 62 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 SNORA40.14-201ENST00000516543 86 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 RNU6-922P-201ENST00000516753 99 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 RNU7-110P-201ENST00000516891 62 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 Y_RNA.772-201ENST00000606692 102 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 AC004832.4-201ENST00000608952 331 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 AC010205.1-201ENST00000616668 449 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 AL121890.5-201ENST00000620848 304 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
NKX2-6A6NCS4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 MIRLET7C-201ENST00000362160 84 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 SNORD68-201ENST00000363214 84 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.148-201ENST00000363557 117 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 SNORD14.1-201ENST00000365609 90 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 RNU6-424P-201ENST00000384367 105 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 MIR660-201ENST00000385235 97 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AL591704.2-201ENST00000421658 181 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 SNX2P2-201ENST00000424553 323 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 PIGPP3-201ENST00000425307 415 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.639-201ENST00000458981 102 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AP002004.2-201ENST00000531656 154 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AC104695.3-201ENST00000604052 296 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AL121655.1-201ENST00000605811 308 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AC090574.1-201ENST00000623186 233 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 AC068647.2-201ENST00000637380 353 ntBASIC0.96□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.230-201ENST00000364348 109 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 RNU4-76P-201ENST00000364509 141 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.439-201ENST00000384119 94 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.535-201ENST00000384612 99 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 MIR1302-11-201ENST00000408051 138 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 MIR1302-9-201ENST00000408365 138 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 MIR1302-10-201ENST00000408734 138 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 RNU6-855P-201ENST00000410395 104 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 MLLT10P1-201ENST00000418346 262 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 SUMO1P2-201ENST00000452524 304 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 U8.20-201ENST00000459445 131 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 RNU6-917P-201ENST00000516294 104 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 AL512310.8-201ENST00000550183 120 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 AC136932.1-201ENST00000574771 208 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 MIR4423-201ENST00000580922 80 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 AC124312.5-201ENST00000604451 268 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 SNORA28-201ENST00000606769 126 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 MIR1302-2-201ENST00000607096 138 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 AC011373.1-201ENST00000607270 237 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 AL513423.1-201ENST00000621695 132 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 AL160413.1-201ENST00000622780 310 ntBASIC0.95□□□□□ -2.26
NKX2-6A6NCS4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 RNA5SP327-201ENST00000362494 101 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.424-201ENST00000384063 103 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 Y_RNA.431-201ENST00000384086 102 ntBASIC0.94□□□□□ -2.26
NKX2-6A6NCS4 MIR598-201ENST00000384868 97 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms