Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 MIR452-201ENST00000385020 85 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 MIR548K-201ENST00000408406 116 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 AL162725.1-201ENST00000435405 301 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 FABP5P4-201ENST00000437203 171 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 RNU6-720P-201ENST00000516363 108 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 Y_RNA.708-201ENST00000516950 96 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 AC055872.1-201ENST00000570978 278 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 EIF1P4-201ENST00000572664 335 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 AC131055.1-201ENST00000584626 316 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 AC018638.8-201ENST00000588755 281 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 AC004467.1-201ENST00000615678 330 ntBASIC0.72□□□□□ -2.29
KIF3AQ9Y496 SNORD115-30-201ENST00000364117 82 ntBASIC0.71□□□□□ -2.3
KIF3AQ9Y496 RNU6-601P-201ENST00000384540 107 ntBASIC0.71□□□□□ -2.3
KIF3AQ9Y496 MIR92A1-201ENST00000385233 78 ntBASIC0.71□□□□□ -2.3
KIF3AQ9Y496 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
KIF3AQ9Y496 AL390729.2-201ENST00000416137 156 ntBASIC0.71□□□□□ -2.3
KIF3AQ9Y496 RNU6-1301P-201ENST00000362724 104 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 MIR520C-201ENST00000385005 87 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 SNORD89-201ENST00000390981 114 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 MIR548F1-201ENST00000408667 84 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 MLLT10P1-201ENST00000418346 262 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.7□□□□□ -2.3
KIF3AQ9Y496 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.7□□□□□ -2.3
KIF3AQ9Y496 SUMO1P2-201ENST00000452524 304 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 RNU6-718P-201ENST00000516166 105 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 AC109810.1-201ENST00000534066 224 ntBASIC0.7□□□□□ -2.3
KIF3AQ9Y496 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KIF3AQ9Y496 RNU6-961P-201ENST00000363893 105 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 RNU6-926P-201ENST00000384075 107 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 RNU6-1310P-201ENST00000384153 107 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 RNU6-1105P-201ENST00000384774 107 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 RPL23AP50-201ENST00000434149 455 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 RNU2-12P-201ENST00000517216 168 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 AP003716.2-201ENST00000528260 108 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.69□□□□□ -2.3
KIF3AQ9Y496 AC004812.1-201ENST00000540773 146 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 SEPT14P17-201ENST00000617978 177 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 AC092794.2-201ENST00000620933 563 ntBASIC0.69□□□□□ -2.3
KIF3AQ9Y496 Y_RNA.172-201ENST00000363765 102 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 RNU6-593P-201ENST00000364716 112 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 RNU6-510P-201ENST00000391239 108 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 SNORD99-201ENST00000408612 74 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 SNORA25.10-201ENST00000515926 124 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 SNORA18.7-201ENST00000516910 131 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 SNORA74.3-201ENST00000517108 154 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.68□□□□□ -2.3
KIF3AQ9Y496 RNU6-94P-201ENST00000607728 107 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 7SK.10-201ENST00000621414 298 ntBASIC0.68□□□□□ -2.3
KIF3AQ9Y496 SNORD114-7-201ENST00000362520 77 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 U8.5-201ENST00000364528 136 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 RNU6-99P-201ENST00000364721 107 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 Y_RNA.361-201ENST00000365515 120 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 MTND3P8-201ENST00000412909 339 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.67□□□□□ -2.3
KIF3AQ9Y496 AC107399.1-201ENST00000451226 265 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.67□□□□□ -2.3
KIF3AQ9Y496 RNA5SP436-201ENST00000516020 115 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 RNU6-120P-201ENST00000516077 103 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 RNU6-1213P-201ENST00000517075 94 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.67□□□□□ -2.3
KIF3AQ9Y496 AC090517.2-201ENST00000614966 680 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 U4.5-201ENST00000617137 123 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 uc_338.17-201ENST00000619633 179 ntBASIC0.67□□□□□ -2.3
KIF3AQ9Y496 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.67□□□□□ -2.3
KIF3AQ9Y496 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
KIF3AQ9Y496 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
KIF3AQ9Y496 Y_RNA.88-201ENST00000363029 99 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 Y_RNA.118-201ENST00000363300 101 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 Y_RNA.253-201ENST00000364562 112 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 Y_RNA.339-201ENST00000365325 102 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 MIR136-201ENST00000385207 82 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 AL031003.1-201ENST00000404229 172 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 MTATP6P26-201ENST00000445926 662 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 MIR2053-201ENST00000459295 91 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 RPL17P19-201ENST00000489069 552 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 AC113410.1-201ENST00000505029 247 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 MIR4764-201ENST00000580680 88 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 MIR4762-201ENST00000585261 75 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 PISRT1.1-201ENST00000616930 107 ntBASIC0.66□□□□□ -2.3
KIF3AQ9Y496 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
KIF3AQ9Y496 RNU6-1084P-201ENST00000362498 107 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 Y_RNA.101-201ENST00000363154 102 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 RNU1-133P-201ENST00000364867 167 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 Y_RNA.318-201ENST00000365131 97 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 MIR489-201ENST00000384923 84 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 MIR522-201ENST00000385071 87 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 RPL30P15-201ENST00000457129 321 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.65□□□□□ -2.31
KIF3AQ9Y496 RN7SKP164-201ENST00000516138 266 ntBASIC0.65□□□□□ -2.31
KIF3AQ9Y496 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
KIF3AQ9Y496 Y_RNA.482-201ENST00000384377 111 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms