Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RPL36AP21-201ENST00000490372 323 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 MTND1P19-201ENST00000511780 315 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 AC136628.3-201ENST00000521868 290 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 AC084364.2-201ENST00000546924 395 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 SUB1P4-201ENST00000566062 339 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.63□□□□□ -2.15
SIX2Q9NPC8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.63□□□□□ -2.15
SIX2Q9NPC8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.62□□□□□ -2.15
SIX2Q9NPC8 RNU6-801P-201ENST00000364087 105 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.217-201ENST00000364214 105 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.275-201ENST00000364726 110 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.307-201ENST00000365022 117 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.401-201ENST00000383965 117 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 RNU6-662P-201ENST00000384253 104 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 MIR548H3-201ENST00000408771 118 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 RNA5SP511-201ENST00000410487 115 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.62□□□□□ -2.15
SIX2Q9NPC8 AL162725.1-201ENST00000435405 301 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.62□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.641-201ENST00000459414 105 ntBASIC1.62□□□□□ -2.15
SIX2Q9NPC8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.62□□□□□ -2.15
SIX2Q9NPC8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SIX2Q9NPC8 AC018630.2-201ENST00000534866 2403 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
SIX2Q9NPC8 RNU6-1272P-201ENST00000362776 107 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 SNORA63D-201ENST00000364359 132 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 SNORA72.4-201ENST00000384174 132 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.447-201ENST00000384184 113 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 AL603910.2-201ENST00000407268 136 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.680-201ENST00000516441 93 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 AC091178.2-201ENST00000584401 117 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 AC010900.2-201ENST00000604508 210 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 AL078604.3-201ENST00000615580 211 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 ZNF702P-202ENST00000434269 1966 ntBASIC1.61□□□□□ -2.15
SIX2Q9NPC8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.61□□□□□ -2.15
SIX2Q9NPC8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SIX2Q9NPC8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SIX2Q9NPC8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNA5SP276-201ENST00000362580 94 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU6-112P-201ENST00000363599 104 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU6-740P-201ENST00000364734 105 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.416-201ENST00000384014 113 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU6-136P-201ENST00000384663 107 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU6-763P-201ENST00000390865 106 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 SNORA26.5-201ENST00000391215 123 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU11-5P-201ENST00000391216 129 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNA5SP100-201ENST00000410903 110 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNA5SP59-201ENST00000410922 110 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.618-201ENST00000410949 107 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU2-14P-201ENST00000411053 191 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 AC104332.1-201ENST00000440471 797 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 AC069257.2-201ENST00000441819 155 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 AL606517.2-201ENST00000442855 241 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RPS27P1-201ENST00000450552 247 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 AC091021.1-201ENST00000468051 388 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 MIR3128-201ENST00000581957 66 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 AC022217.4-201ENST00000604389 163 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 AL645939.4-201ENST00000604495 135 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 AC005972.2-201ENST00000604690 348 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 MIR6079-201ENST00000635807 62 ntBASIC1.6□□□□□ -2.15
SIX2Q9NPC8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SIX2Q9NPC8 RNU6-1048P-201ENST00000364054 107 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 RNU6-1323P-201ENST00000384025 107 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.477-201ENST00000384352 108 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 RNU6-1289P-201ENST00000384431 106 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 MIR520G-201ENST00000385064 90 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 MT-TG-201ENST00000387429 68 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 AL158823.1-201ENST00000418441 478 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 RPS4XP11-201ENST00000446897 772 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.637-201ENST00000459424 114 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 RNU7-94P-201ENST00000459576 63 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 AL162424.1-201ENST00000602325 221 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.59□□□□□ -2.15
SIX2Q9NPC8 AC068647.2-201ENST00000637380 353 ntBASIC1.59□□□□□ -2.15
SIX2Q9NPC8 AC008555.8-201ENST00000623602 2168 ntBASIC1.59□□□□□ -2.16
SIX2Q9NPC8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SIX2Q9NPC8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SIX2Q9NPC8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.20-201ENST00000362479 113 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.54-201ENST00000362766 105 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.60-201ENST00000362831 98 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.82-201ENST00000363000 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.92-201ENST00000363043 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.117-201ENST00000363294 101 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.235-201ENST00000364412 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.277-201ENST00000364754 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 RNU6-60P-201ENST00000364792 103 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.306-201ENST00000365015 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.312-201ENST00000365089 102 ntBASIC1.58□□□□□ -2.16
SIX2Q9NPC8 Y_RNA.322-201ENST00000365151 102 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms