Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 SNORD26-201ENST00000384147 75 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 MIR515-2-201ENST00000384883 83 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 MIR515-1-201ENST00000384884 83 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 AL590004.1-201ENST00000405321 300 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 RNU5A-5P-201ENST00000411054 116 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.12□□□□□ -2.23
NANOGQ9H9S0 ELOCP20-201ENST00000422460 345 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 AC098869.1-201ENST00000481627 292 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.12□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.715-201ENST00000517082 110 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 RNU6-897P-201ENST00000517135 105 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.12□□□□□ -2.23
NANOGQ9H9S0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.12□□□□□ -2.23
NANOGQ9H9S0 MIR4422-201ENST00000581938 83 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 RPS29P30-201ENST00000600975 111 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 AL356055.1-201ENST00000602528 446 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 AC127459.3-201ENST00000624328 466 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.153-201ENST00000363615 91 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.230-201ENST00000364348 109 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.267-201ENST00000364679 109 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.439-201ENST00000384119 94 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.551-201ENST00000384661 102 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.11□□□□□ -2.23
NANOGQ9H9S0 RPS4XP11-201ENST00000446897 772 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 RNU7-34P-201ENST00000459394 64 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC025465.3-201ENST00000510570 311 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 MIR4709-201ENST00000577272 72 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC015688.6-201ENST00000577737 104 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC113195.1-201ENST00000579952 141 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 MIR4300-201ENST00000581016 96 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC044792.1-201ENST00000593294 196 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.772-201ENST00000606692 102 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC004832.4-201ENST00000608952 331 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC040896.1-201ENST00000613819 479 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.11□□□□□ -2.23
NANOGQ9H9S0 AC068700.1-201ENST00000565862 3754 ntBASIC1.11□□□□□ -2.23
NANOGQ9H9S0 RNY1P10-201ENST00000363268 113 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU6-414P-201ENST00000363705 104 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU6-324P-201ENST00000363957 106 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU6-694P-201ENST00000364071 147 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 SNORD1A-201ENST00000364968 72 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.389-201ENST00000383924 113 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU6-376P-201ENST00000384731 106 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 MIR215-201ENST00000384858 110 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 MIR1267-201ENST00000408723 78 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 CALM2P4-201ENST00000430810 426 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 Z98949.2-201ENST00000440996 144 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 AC069257.2-201ENST00000441819 155 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.1□□□□□ -2.23
NANOGQ9H9S0 STAG3L5P-204ENST00000443759 179 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 HSPE1P13-201ENST00000451143 297 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RPL36AP21-201ENST00000490372 323 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 OR9P1P-201ENST00000496431 281 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNA5SP481-201ENST00000516814 122 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU7-110P-201ENST00000516891 62 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.1□□□□□ -2.23
NANOGQ9H9S0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NANOGQ9H9S0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.1□□□□□ -2.23
NANOGQ9H9S0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.1□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.158-201ENST00000363651 101 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 SNORA33.2-201ENST00000365413 134 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 RNU6-1227P-201ENST00000383981 107 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.418-201ENST00000384029 102 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.424-201ENST00000384063 103 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.462-201ENST00000384268 102 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 MIR1252-201ENST00000408861 65 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 AC113618.1-201ENST00000416747 285 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 RPL21P38-201ENST00000418090 167 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 AL162725.1-201ENST00000435405 301 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 HSPE1P25-201ENST00000455484 251 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 RNU6-988P-201ENST00000519081 107 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 SUMO2P16-201ENST00000519475 264 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.09□□□□□ -2.23
NANOGQ9H9S0 AC006380.1-201ENST00000603598 186 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 AL138825.1-201ENST00000618587 192 ntBASIC1.09□□□□□ -2.23
NANOGQ9H9S0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.24
NANOGQ9H9S0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
NANOGQ9H9S0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
NANOGQ9H9S0 MIRLET7C-201ENST00000362160 84 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 snoU2_19.2-201ENST00000363024 80 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 RNU4-50P-201ENST00000364361 141 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 RNU4-41P-201ENST00000364426 143 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 SNORD63-201ENST00000384262 68 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 U8.16-201ENST00000391279 133 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 Y_RNA.602-201ENST00000410535 92 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 RNU6-321P-201ENST00000410912 106 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 RNU2-14P-201ENST00000411053 191 ntBASIC1.08□□□□□ -2.24
NANOGQ9H9S0 COX6CP10-201ENST00000416832 224 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms