Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU6-264P-201ENST00000517134 104 ntBASIC0.86□□□□□ -2.27
POLR1EQ9GZS1 FAM106DP-201ENST00000586416 501 ntBASIC0.86□□□□□ -2.27
POLR1EQ9GZS1 AL096861.1-201ENST00000610899 123 ntBASIC0.86□□□□□ -2.27
POLR1EQ9GZS1 MIR8070-201ENST00000616510 88 ntBASIC0.86□□□□□ -2.27
POLR1EQ9GZS1 AL008636.1-201ENST00000625038 1018 ntBASIC0.86□□□□□ -2.27
POLR1EQ9GZS1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
POLR1EQ9GZS1 AC008163.1-202ENST00000636004 2889 ntBASIC0.86□□□□□ -2.27
POLR1EQ9GZS1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 RNU6-833P-201ENST00000363486 107 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 AL031003.1-201ENST00000404229 172 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 RNU6-1199P-201ENST00000411249 104 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 LINC01399-202ENST00000458450 244 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 MIR5690-201ENST00000583739 73 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 AC011476.5-201ENST00000615594 130 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 AC240442.1-201ENST00000616055 283 ntBASIC0.85□□□□□ -2.27
POLR1EQ9GZS1 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 SNORD68-201ENST00000363214 84 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 Y_RNA.164-201ENST00000363709 102 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 RNU6-708P-201ENST00000384217 107 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 MIR891A-201ENST00000401237 79 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 RNU2-54P-201ENST00000410299 190 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 AC114811.1-201ENST00000507207 168 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 SNORA25.10-201ENST00000515926 124 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 AC120024.3-201ENST00000603167 156 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 AL591926.4-201ENST00000616895 298 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 AC138305.3-201ENST00000624988 240 ntBASIC0.84□□□□□ -2.27
POLR1EQ9GZS1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.28
POLR1EQ9GZS1 RNU6-626P-201ENST00000363354 107 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 RNU6-20P-201ENST00000384106 107 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 RNU6-163P-201ENST00000384396 106 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 RNY3P4-201ENST00000384428 101 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.621-201ENST00000411065 96 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 AC093019.1-201ENST00000443135 252 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 FCF1P4-201ENST00000448326 183 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 CYCTP-201ENST00000504253 315 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 RNU6-559P-201ENST00000516151 98 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 RNU6-1012P-201ENST00000516606 109 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 MIR3192-201ENST00000584920 77 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 AC004832.4-201ENST00000608952 331 ntBASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.83□□□□□ -2.28
POLR1EQ9GZS1 RNU6-969P-201ENST00000383900 105 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 RNU2-61P-201ENST00000411069 191 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC096644.2-201ENST00000429278 159 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 RNU6-436P-201ENST00000516171 114 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 RNU7-4P-201ENST00000516961 62 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC144568.1-201ENST00000520139 137 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC011604.1-201ENST00000545978 196 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC005176.2-201ENST00000596933 147 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC006380.1-201ENST00000603598 186 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC136443.5-201ENST00000603741 370 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC113139.1-201ENST00000605049 239 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 AC027279.3-201ENST00000625055 122 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 MTND4LP32-201ENST00000636111 270 ntBASIC0.82□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.336-201ENST00000365307 109 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.390-201ENST00000383932 102 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.446-201ENST00000384178 104 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 MIR559-201ENST00000385188 96 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 SNORA75.2-201ENST00000391138 150 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 SNORA75.3-201ENST00000391231 150 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.605-201ENST00000410577 105 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 AC138393.2-201ENST00000414742 246 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 CHEK2P4-201ENST00000450340 246 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.653-201ENST00000459091 95 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 RNU7-90P-201ENST00000459216 62 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 SNORA70.12-201ENST00000516084 153 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 SNORA20.3-201ENST00000516880 132 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 MIR4659A-201ENST00000580269 81 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 AC108706.1-201ENST00000611053 297 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 AL355073.2-201ENST00000612106 557 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 MIR6504-201ENST00000613520 61 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 U2.1-201ENST00000618978 145 ntBASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
POLR1EQ9GZS1 U8.5-201ENST00000364528 136 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 SNORA25.9-201ENST00000365087 128 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 Y_RNA.314-201ENST00000365114 102 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 SNORD78.2-201ENST00000391076 69 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 MIR1298-201ENST00000408783 112 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 RNU6-155P-201ENST00000516347 100 ntBASIC0.8□□□□□ -2.28
POLR1EQ9GZS1 SNORD111.1-201ENST00000516421 86 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms