Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 AC006386.2-201ENST00000624491 75 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 AC012005.1-201ENST00000624575 75 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 U8.1-201ENST00000362843 134 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 SNORA33-201ENST00000363664 130 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 RNU6-215P-201ENST00000365169 102 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 RNA5SP323-201ENST00000391094 133 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 AL117342.1-201ENST00000404861 406 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 SNRPGP10-201ENST00000432323 225 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 AC018634.1-201ENST00000437554 401 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 RNU7-107P-201ENST00000459121 61 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 RN7SL499P-201ENST00000481141 276 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 RNU6-365P-201ENST00000517113 106 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
PTCHD1Q96NR3 AL035425.3-201ENST00000564206 4996 ntBASIC2.71□□□□□ -1.97
PTCHD1Q96NR3 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 Y_RNA.294-201ENST00000364916 102 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AL139132.1-201ENST00000431587 344 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 RPL39P40-201ENST00000445481 146 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AP004217.1-201ENST00000480579 346 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 RN7SKP179-201ENST00000516126 217 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 Y_RNA.692-201ENST00000516627 105 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AL358944.1-201ENST00000528537 144 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AC090049.2-201ENST00000550377 109 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AC245060.5-201ENST00000610778 3293 ntBASIC2.71□□□□□ -1.98
PTCHD1Q96NR3 AL355596.1-201ENST00000565399 3996 ntBASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 SNORA8-201ENST00000384574 139 ntBASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 MIR515-2-201ENST00000384883 83 ntBASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 MIR515-1-201ENST00000384884 83 ntBASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 SNORA12.1-201ENST00000390873 148 ntBASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 MRPS17P9-201ENST00000511924 393 ntBASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
PTCHD1Q96NR3 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 RNU6-235P-201ENST00000362644 107 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 Y_RNA.563-201ENST00000384707 108 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 RPS26P45-201ENST00000471748 340 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 SNORA18.4-201ENST00000516440 124 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 RNU6-504P-201ENST00000516568 104 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 AC024995.1-201ENST00000523014 93 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 AC007751.1-201ENST00000529260 376 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 EIF4BP1-201ENST00000554881 351 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 MAPK10-266ENST00000641066 6555 ntBASIC2.69□□□□□ -1.98
PTCHD1Q96NR3 MIR126-201ENST00000362291 85 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 RNU6-834P-201ENST00000362367 110 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 RNA5SP493-201ENST00000364115 91 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 SNORD18B-201ENST00000365659 72 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 Y_RNA.525-201ENST00000384570 113 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 RN7SKP284-201ENST00000411002 343 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 CST2P1-201ENST00000425770 87 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 AC107083.1-201ENST00000439643 279 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 AC104389.3-201ENST00000445629 235 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 RNU7-94P-201ENST00000459576 63 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 RNA5SP367-201ENST00000516557 118 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 AC008507.4-201ENST00000585464 127 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 AL591926.4-201ENST00000616895 298 ntBASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCHD1Q96NR3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 SNORA1B-201ENST00000362535 133 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 RNU6-862P-201ENST00000362804 105 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 MIR512-1-201ENST00000384913 84 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 MIR624-201ENST00000385217 97 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 RNA5SP127-201ENST00000411051 133 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 MLLT10P1-201ENST00000418346 262 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 AL135938.1-201ENST00000443141 297 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 AL163195.1-201ENST00000496941 348 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 Y_RNA.712-201ENST00000517011 92 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 AP002004.2-201ENST00000531656 154 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 AL365205.2-201ENST00000594586 68 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 MIR7106-201ENST00000612419 65 ntBASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCHD1Q96NR3 SNORA80A-201ENST00000363922 136 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 RNU6-1325P-201ENST00000364905 105 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 SNORD72-201ENST00000390994 80 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 AL603914.1-201ENST00000401964 204 ntBASIC2.66□□□□□ -1.98
PTCHD1Q96NR3 AL158823.1-201ENST00000418441 478 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms