Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC046134.1-201ENST00000514454 666 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 Vault.3-201ENST00000516676 95 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 AC018714.1-201ENST00000605028 208 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 MIR6514-201ENST00000622549 70 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 AC091304.10-201ENST00000641554 121 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 SNORD114-11-201ENST00000363738 75 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-501P-201ENST00000364072 100 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 SNORD115-32-201ENST00000364079 82 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-30P-201ENST00000384561 107 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 SNORA32.3-201ENST00000384772 121 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 MIR1-2-201ENST00000384961 85 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 SSR1P2-201ENST00000415208 787 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 AL354751.2-201ENST00000415471 210 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 Z82188.1-201ENST00000436709 154 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 MIR18B-201ENST00000454574 71 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 AC114755.3-201ENST00000481111 251 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 AC093303.1-201ENST00000514549 295 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-107P-201ENST00000516643 102 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 UBL5P4-201ENST00000562584 236 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 CPDP1-201ENST00000579660 283 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 MIR5583-1-201ENST00000580941 59 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 MIR3925-201ENST00000584674 77 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 AL133173.2-201ENST00000614270 90 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 AL049777.1-201ENST00000622740 518 ntBASIC-0.67□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-480P-201ENST00000384332 107 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 ELOCP21-201ENST00000412558 336 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 AL512286.1-201ENST00000439244 400 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 AC104576.1-201ENST00000524225 88 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 MIR548AD-201ENST00000584780 82 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 AC121247.2-201ENST00000604776 136 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 MIR4791-201ENST00000607666 84 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 AL162726.3-218ENST00000636401 95 ntBASIC-0.68□□□□□ -2.52
TRAV17A0A0B4J275 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 MTCYBP4-201ENST00000401524 249 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 MCFD2P1-201ENST00000417812 300 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 HMGN2P32-201ENST00000444648 269 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 SNORA25.10-201ENST00000515926 124 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 AC007751.1-201ENST00000529260 376 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 AL137161.1-201ENST00000532231 390 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 AC005828.6-201ENST00000606610 232 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 AL136370.1-201ENST00000608166 691 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.69□□□□□ -2.52
TRAV17A0A0B4J275 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-83P-201ENST00000384568 112 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-159P-201ENST00000391080 106 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 RPL21P38-201ENST00000418090 167 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 AC074198.2-201ENST00000508153 258 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 AC010486.3-201ENST00000511602 785 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 U2.17-201ENST00000611454 95 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 AC027807.2-201ENST00000616099 408 ntBASIC-0.7□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 SNORD28-201ENST00000384706 75 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 MIR518F-201ENST00000384973 87 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 U8.17-201ENST00000391292 132 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 RNU2-29P-201ENST00000410423 189 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 MTND2P9-201ENST00000422293 931 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 USP9YP12-201ENST00000450481 570 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-830P-201ENST00000516353 107 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 SNORA31.14-201ENST00000516728 116 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 RNU7-181P-201ENST00000517234 74 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 CR383656.4-201ENST00000546909 122 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 MIR4432-201ENST00000581823 84 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 SNORA70.25-201ENST00000612741 95 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 MIR8066-201ENST00000617280 78 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 AC009248.2-201ENST00000619826 254 ntBASIC-0.71□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-606P-201ENST00000384721 111 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 MIR521-1-201ENST00000384902 87 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 MIR873-201ENST00000401120 77 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.72□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-855P-201ENST00000410395 104 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms