Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 U7.8-201ENST00000619968 63 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 ZNF720P1-201ENST00000562403 1939 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-349P-201ENST00000362402 107 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 SNORD9-201ENST00000362566 104 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 SNORD14E-201ENST00000364009 85 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 SNORD114-6-201ENST00000364393 72 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 SNORD73B-201ENST00000364394 72 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 U8.5-201ENST00000364528 136 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 RPS29P12-201ENST00000460178 152 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 RNU7-25P-201ENST00000516544 62 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 RN7SKP57-201ENST00000517248 293 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 MIR8058-201ENST00000615737 89 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHB11Q9Y5F2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PCDHB11Q9Y5F2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SNORD68-201ENST00000363214 84 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SNORD115-28-201ENST00000363931 81 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 RNA5SP42-201ENST00000364278 115 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-294P-201ENST00000364999 102 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SNORA51.10-201ENST00000384418 136 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-220P-201ENST00000390919 107 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 AC003685.2-201ENST00000422795 395 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SNRPGP14-201ENST00000435400 219 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 AC099677.2-201ENST00000436385 175 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SNORA40.13-201ENST00000516379 120 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 MIR3651-201ENST00000630427 90 ntBASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHB11Q9Y5F2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 Y_RNA.37-201ENST00000362606 108 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-268P-201ENST00000364174 107 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 Y_RNA.544-201ENST00000384650 113 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 CST2P1-201ENST00000425770 87 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 ARF4P2-201ENST00000430209 526 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 RNU2-27P-201ENST00000516185 142 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 IGKV3-31-201ENST00000523109 329 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 RNVU1-4-201ENST00000612985 164 ntBASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB11Q9Y5F2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-414P-201ENST00000363705 104 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-1131P-201ENST00000364955 107 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 SNORA25B-201ENST00000365507 128 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 Y_RNA.547-201ENST00000384654 119 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 MIR490-201ENST00000384865 128 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 MIR759-201ENST00000390224 91 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 RNA5SP120-201ENST00000410900 112 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 AL163195.1-201ENST00000496941 348 ntBASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-1084P-201ENST00000362498 107 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 Y_RNA.298-201ENST00000364960 107 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 snoU2-30.1-201ENST00000365012 70 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 RNY1P6-201ENST00000384193 109 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-830P-201ENST00000516353 107 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 RNU7-70P-201ENST00000516941 66 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 MIR4425-201ENST00000580572 84 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 AC021443.1-201ENST00000604478 211 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 CTSLP2-204ENST00000629029 392 ntBASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHB11Q9Y5F2 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 Y_RNA.440-201ENST00000384120 114 ntBASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-160P-201ENST00000384591 107 ntBASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 RNU6-440P-201ENST00000390882 105 ntBASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 AL445646.1-201ENST00000431784 216 ntBASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 RN7SL594P-201ENST00000470590 287 ntBASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 AC021205.2-201ENST00000480069 347 ntBASIC3.42□□□□□ -1.86
PCDHB11Q9Y5F2 RN7SKP43-201ENST00000516173 320 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 260.9 ms