Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-63P-201ENST00000516690 95 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 UBE2WP1-201ENST00000362030 340 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.76-201ENST00000362931 109 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1048P-201ENST00000364054 107 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-801P-201ENST00000364087 105 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.269-201ENST00000364685 89 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 SNORD116-13-201ENST00000384408 92 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1289P-201ENST00000384431 106 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 RNA5SP467-201ENST00000391274 118 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 AC024067.1-201ENST00000426199 223 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 ATP5J2P3-201ENST00000451550 258 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 RPS26P55-201ENST00000471178 356 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 SNORA70.12-201ENST00000516084 153 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 RNA5SP137-201ENST00000516833 135 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 MIR4438-201ENST00000585271 93 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 AC134026.1-201ENST00000623249 2239 ntBASIC1.89□□□□□ -2.11
SMARCAL1Q9NZC9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU1-58P-201ENST00000362413 163 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-862P-201ENST00000362804 105 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 SNORA33-201ENST00000363664 130 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.217-201ENST00000364214 105 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.341-201ENST00000365341 102 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.478-201ENST00000384358 107 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-136P-201ENST00000384663 107 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 MIR504-201ENST00000385065 83 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 AL117342.1-201ENST00000404861 406 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RNU2-14P-201ENST00000411053 191 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 AL353689.1-201ENST00000438895 199 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 SUMO1P2-201ENST00000452524 304 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.641-201ENST00000459414 105 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 SUMO2P18-201ENST00000518873 252 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 AL162424.1-201ENST00000602325 221 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 BX284668.6-201ENST00000606899 438 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 snoU18.1-201ENST00000629629 71 ntBASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCAL1Q9NZC9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.310-201ENST00000365063 113 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-763P-201ENST00000390865 106 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1248P-201ENST00000391096 64 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 SNORA26.5-201ENST00000391215 123 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 MIR1283-2-201ENST00000408621 87 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-710P-201ENST00000410424 105 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 AC099677.2-201ENST00000436385 175 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 U8.19-201ENST00000459095 133 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.637-201ENST00000459424 114 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 AL137100.2-201ENST00000555786 315 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 AC024614.2-201ENST00000577584 372 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 U6.73-201ENST00000619194 103 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 MIR7843-201ENST00000622274 79 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 AC006435.5-201ENST00000624486 112 ntBASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMARCAL1Q9NZC9 SNORD114-7-201ENST00000362520 77 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 RNA5SP276-201ENST00000362580 94 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.122-201ENST00000363331 96 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 RNU1-22P-201ENST00000363334 158 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.368-201ENST00000365547 113 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 MIR518A2-201ENST00000384966 87 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.590-201ENST00000410140 107 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 RNA5SP511-201ENST00000410487 115 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 BTF3P11-201ENST00000426582 477 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 HMGN2P3-201ENST00000433603 273 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 HMGN2P5-201ENST00000436882 273 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 RPS20P10-201ENST00000451209 253 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms