Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 SNORD114-7-201ENST00000362520 77 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 SNORD14.1-201ENST00000365609 90 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 RNU6-831P-201ENST00000384548 107 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 MTND1P17-201ENST00000448961 204 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 RNU6-506P-201ENST00000516553 94 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 AC009229.3-201ENST00000608056 282 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 AL136317.1-201ENST00000612653 226 ntBASIC0.53□□□□□ -2.32
LRRC40Q9H9A6 RNY1P16-201ENST00000363063 111 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 Y_RNA.243-201ENST00000364481 109 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 MTCYBP10-201ENST00000424905 650 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 AC092423.1-201ENST00000430165 186 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 SNORA18.7-201ENST00000516910 131 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 MIR4764-201ENST00000580680 88 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 RNU6-94P-201ENST00000607728 107 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 AF250324.2-201ENST00000608299 610 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 MIR6788-201ENST00000618842 66 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 AC100810.6-201ENST00000638068 285 ntBASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
LRRC40Q9H9A6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 Y_RNA.164-201ENST00000363709 102 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 U8.5-201ENST00000364528 136 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 RNU6-1310P-201ENST00000384153 107 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 RNU6-994P-201ENST00000410507 111 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 MTND1P29-201ENST00000448112 647 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 U8.22-201ENST00000459141 133 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 SNORA40.9-201ENST00000515895 93 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 RN7SKP164-201ENST00000516138 266 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 MIR4762-201ENST00000585261 75 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 Z83818.1-201ENST00000603584 150 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 AC005014.2-201ENST00000607795 599 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.51□□□□□ -2.33
LRRC40Q9H9A6 Y_RNA.402-201ENST00000383972 102 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 RNU6-1067P-201ENST00000384752 107 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 MIR15B-201ENST00000385045 98 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 SNORD111-201ENST00000408139 94 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 MIR548J-201ENST00000408833 112 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 AL139396.1-201ENST00000421137 167 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 AC105029.1-201ENST00000520250 669 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 AC036111.3-201ENST00000526389 112 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 AC245505.1-201ENST00000556398 224 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
LRRC40Q9H9A6 Y_RNA.2-201ENST00000362330 96 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 RNU6-874P-201ENST00000362390 105 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 RNA5SP48-201ENST00000363969 126 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 AC117470.1-201ENST00000381974 330 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 Y_RNA.559-201ENST00000384686 107 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 MLLT10P1-201ENST00000418346 262 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 MTND3P21-201ENST00000433774 331 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 RNU6-1337P-201ENST00000516525 95 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 RNU7-43P-201ENST00000516554 64 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 MIR4790-201ENST00000577799 79 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 MIR151B-201ENST00000584249 96 ntBASIC0.49□□□□□ -2.33
LRRC40Q9H9A6 RNU6-1084P-201ENST00000362498 107 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 Y_RNA.358-201ENST00000365491 99 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 RNU6-318P-201ENST00000384283 103 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 RNU6-1148P-201ENST00000410992 104 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 RNA5SP222-201ENST00000411039 105 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 AL390729.2-201ENST00000416137 156 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 AC244098.3-201ENST00000424803 96 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 RNU11-2P-201ENST00000516898 142 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 AF235103.2-201ENST00000525753 346 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 AC018462.2-201ENST00000605375 395 ntBASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.48□□□□□ -2.33
LRRC40Q9H9A6 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 Y_RNA.473-201ENST00000384333 102 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 AC074085.1-201ENST00000413598 418 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 AC098826.2-201ENST00000452011 651 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 SNORD45.4-201ENST00000516629 73 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 MTND2P38-201ENST00000522536 667 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 AC093027.1-201ENST00000546698 429 ntBASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.47□□□□□ -2.33
LRRC40Q9H9A6 AL442644.1-201ENST00000454390 3105 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 SNORD113.3-201ENST00000364630 78 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.301-201ENST00000364990 103 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 SNORA36.2-201ENST00000384004 127 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.517-201ENST00000384551 106 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 AL353997.1-201ENST00000432936 108 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 AC026782.1-201ENST00000512952 449 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 MIR5000-201ENST00000577717 103 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms