Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.04□□□□□ -2.24
VMP1Q96GC9 MIR1244-1-201ENST00000612829 85 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 MIR1244-3-201ENST00000635744 85 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 MIR1244-2-201ENST00000636449 85 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 MIR1244-4-202ENST00000636813 85 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 AC008163.1-202ENST00000636004 2889 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
VMP1Q96GC9 Y_RNA.243-201ENST00000364481 109 ntBASIC1.03□□□□□ -2.24
VMP1Q96GC9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.03□□□□□ -2.24
VMP1Q96GC9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.03□□□□□ -2.24
VMP1Q96GC9 PDCD5P2-201ENST00000507570 312 ntBASIC1.03□□□□□ -2.24
VMP1Q96GC9 ACA64.5-201ENST00000516207 127 ntBASIC1.03□□□□□ -2.24
VMP1Q96GC9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.03□□□□□ -2.24
VMP1Q96GC9 TPTEP1-208ENST00000636884 213 ntBASIC1.03□□□□□ -2.24
VMP1Q96GC9 RNU6-99P-201ENST00000364721 107 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 RNU6-163P-201ENST00000384396 106 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 AC114482.1-201ENST00000418010 247 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 MIR2053-201ENST00000459295 91 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 COX6CP14-201ENST00000469580 174 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 RPS26P48-201ENST00000491713 339 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.02□□□□□ -2.25
VMP1Q96GC9 MIR2355-201ENST00000517199 87 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.02□□□□□ -2.25
VMP1Q96GC9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 AC080078.3-201ENST00000605407 463 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 AC004832.4-201ENST00000608952 331 ntBASIC1.02□□□□□ -2.25
VMP1Q96GC9 RNU6-1301P-201ENST00000362724 104 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 SNORD81.2-201ENST00000365153 76 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 SNORD12B-201ENST00000410433 91 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 RNU6-370P-201ENST00000411008 104 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.01□□□□□ -2.25
VMP1Q96GC9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.01□□□□□ -2.25
VMP1Q96GC9 CYCTP-201ENST00000504253 315 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 RNU6-63P-201ENST00000516690 95 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
VMP1Q96GC9 MIR8070-201ENST00000616510 88 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 AC022306.2-201ENST00000617563 647 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 AC027279.3-201ENST00000625055 122 ntBASIC1.01□□□□□ -2.25
VMP1Q96GC9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VMP1Q96GC9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
VMP1Q96GC9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1□□□□□ -2.25
VMP1Q96GC9 RNU6-969P-201ENST00000383900 105 ntBASIC1□□□□□ -2.25
VMP1Q96GC9 Y_RNA.646-201ENST00000410980 101 ntBASIC1□□□□□ -2.25
VMP1Q96GC9 RNU7-90P-201ENST00000459216 62 ntBASIC1□□□□□ -2.25
VMP1Q96GC9 RNU7-21P-201ENST00000459430 62 ntBASIC1□□□□□ -2.25
VMP1Q96GC9 AC120024.3-201ENST00000603167 156 ntBASIC1□□□□□ -2.25
VMP1Q96GC9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.99□□□□□ -2.25
VMP1Q96GC9 SNORD68-201ENST00000363214 84 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 RNU6-1188P-201ENST00000363795 107 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 RNU6-310P-201ENST00000384655 107 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 RNU6-1105P-201ENST00000384774 107 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 Y_RNA.577-201ENST00000384794 101 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 MIR526A1-201ENST00000384897 85 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 MIR625-201ENST00000385047 85 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 SNORA75.6-201ENST00000391318 127 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 RNA5SP511-201ENST00000410487 115 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 RNU2-64P-201ENST00000411315 191 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.99□□□□□ -2.25
VMP1Q96GC9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.99□□□□□ -2.25
VMP1Q96GC9 ELOCP24-201ENST00000456370 334 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 AC245047.8-201ENST00000456455 284 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.99□□□□□ -2.25
VMP1Q96GC9 RNU6-120P-201ENST00000516077 103 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 SNORD111.1-201ENST00000516421 86 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 AC090142.3-201ENST00000519012 385 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 AL096861.1-201ENST00000610899 123 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 AC087588.2-201ENST00000617667 426 ntBASIC0.99□□□□□ -2.25
VMP1Q96GC9 SNORA69.1-201ENST00000390904 137 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 Y_RNA.592-201ENST00000410274 109 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 RNU6-1156P-201ENST00000410365 100 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 Y_RNA.621-201ENST00000411065 96 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 MTND4P28-201ENST00000426217 387 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.98□□□□□ -2.25
VMP1Q96GC9 SNORA70.12-201ENST00000516084 153 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 RNA5SP102-201ENST00000516865 106 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 RNU6-264P-201ENST00000517134 104 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.98□□□□□ -2.25
VMP1Q96GC9 MIR5690-201ENST00000583739 73 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
VMP1Q96GC9 MIR4653-201ENST00000585107 83 ntBASIC0.98□□□□□ -2.25
VMP1Q96GC9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
VMP1Q96GC9 Y_RNA.336-201ENST00000365307 109 ntBASIC0.97□□□□□ -2.25
VMP1Q96GC9 SNORD116-13-201ENST00000384408 92 ntBASIC0.97□□□□□ -2.25
VMP1Q96GC9 AL354751.2-201ENST00000415471 210 ntBASIC0.97□□□□□ -2.25
VMP1Q96GC9 PIGPP3-201ENST00000425307 415 ntBASIC0.97□□□□□ -2.25
VMP1Q96GC9 RNU6-408P-201ENST00000515910 100 ntBASIC0.97□□□□□ -2.25
VMP1Q96GC9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.97□□□□□ -2.25
VMP1Q96GC9 AL391903.3-201ENST00000612158 163 ntBASIC0.97□□□□□ -2.25
VMP1Q96GC9 AC004467.1-201ENST00000615678 330 ntBASIC0.97□□□□□ -2.25
VMP1Q96GC9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
VMP1Q96GC9 SNORA25.9-201ENST00000365087 128 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 RNU6-1080P-201ENST00000383982 107 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 RNU6-890P-201ENST00000384121 107 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 Y_RNA.474-201ENST00000384341 102 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 MIR452-201ENST00000385020 85 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms