Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNY1-201ENST00000364228 113 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 Y_RNA.292-201ENST00000364904 97 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 MIR27B-201ENST00000385129 97 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 RNU2-52P-201ENST00000410680 190 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 AC063976.3-201ENST00000426849 329 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.92□□□□□ -2.1
NPIPB3Q92617 RNU6-437P-201ENST00000459408 95 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.92□□□□□ -2.1
NPIPB3Q92617 SNORA31.17-201ENST00000516953 127 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 RNU6-388P-201ENST00000517012 105 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 RNU6-389P-201ENST00000517048 105 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 AL137847.3-201ENST00000611521 109 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 MIR8054-201ENST00000620877 86 ntBASIC1.92□□□□□ -2.1
NPIPB3Q92617 MIR21-201ENST00000362134 72 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 RNU6-674P-201ENST00000363831 107 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 Y_RNA.304-201ENST00000365011 112 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 SNORA80E-201ENST00000384744 137 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 RNU6-440P-201ENST00000390882 105 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 RN7SKP200-201ENST00000410564 320 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 COX6CP10-201ENST00000416832 224 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.91□□□□□ -2.1
NPIPB3Q92617 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.91□□□□□ -2.1
NPIPB3Q92617 AL049830.1-201ENST00000468034 425 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 COX6CP14-201ENST00000469580 174 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.91□□□□□ -2.1
NPIPB3Q92617 SNORD116-28-201ENST00000516123 91 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 RNU7-28P-201ENST00000516759 62 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 SNORA70.24-201ENST00000517233 118 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.91□□□□□ -2.1
NPIPB3Q92617 SNORA28-201ENST00000606769 126 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 AC090425.1-201ENST00000610007 140 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 U4.3-201ENST00000621047 82 ntBASIC1.91□□□□□ -2.1
NPIPB3Q92617 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NPIPB3Q92617 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
NPIPB3Q92617 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NPIPB3Q92617 MIR367-201ENST00000362299 68 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 Y_RNA.203-201ENST00000364106 102 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 SNORD114-30-201ENST00000364448 72 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 Y_RNA.262-201ENST00000364641 102 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 Y_RNA.265-201ENST00000364677 108 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 RNY4P28-201ENST00000365281 93 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 RNU6-1080P-201ENST00000383982 107 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 MIR128-1-201ENST00000384921 82 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 HSPE1P9-201ENST00000440046 311 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.9□□□□□ -2.11
NPIPB3Q92617 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 MIR4724-201ENST00000579485 89 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 MIR5688-201ENST00000580619 83 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 MIR2681-201ENST00000581814 105 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 AL929325.1-201ENST00000603096 117 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 AC009779.6-201ENST00000603972 165 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 Y_RNA.802-201ENST00000614892 130 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 AC078938.1-201ENST00000620993 318 ntBASIC1.9□□□□□ -2.11
NPIPB3Q92617 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.9□□□□□ -2.11
NPIPB3Q92617 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.9□□□□□ -2.11
NPIPB3Q92617 RNU6-1318P-201ENST00000365389 103 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 SNORA8.3-201ENST00000384679 139 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 MIR144-201ENST00000384886 86 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 MIR526A2-201ENST00000390198 65 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 SNORA48.2-201ENST00000390926 124 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 RNA5SP482-201ENST00000391269 118 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.89□□□□□ -2.11
NPIPB3Q92617 RNA5SP320-201ENST00000516263 124 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 AC100767.1-201ENST00000528178 123 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 AC091544.4-201ENST00000555268 342 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 GTF3AP2-201ENST00000557014 266 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 MIR4709-201ENST00000577272 72 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 AL365265.1-201ENST00000621045 234 ntBASIC1.89□□□□□ -2.11
NPIPB3Q92617 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NPIPB3Q92617 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
NPIPB3Q92617 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPIPB3Q92617 AL596028.1-201ENST00000326971 197 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 Y_RNA.200-201ENST00000364018 102 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 Y_RNA.257-201ENST00000364596 102 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 SNORA4.2-201ENST00000365313 147 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 RNU6-360P-201ENST00000390944 104 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 AL034345.1-201ENST00000407768 123 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 MIR1298-201ENST00000408783 112 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 SNORA11-201ENST00000408789 128 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 FTH1P12-201ENST00000432137 551 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 AC108059.2-201ENST00000434626 151 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 STAG3L5P-204ENST00000443759 179 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.88□□□□□ -2.11
NPIPB3Q92617 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 RNU7-34P-201ENST00000459394 64 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 SNORA31.10-201ENST00000516482 106 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.88□□□□□ -2.11
NPIPB3Q92617 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 AC005000.2-201ENST00000605468 310 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 AC011921.3-201ENST00000605540 361 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 AC067747.1-201ENST00000608026 250 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 JPX_2.1-201ENST00000614161 69 ntBASIC1.88□□□□□ -2.11
NPIPB3Q92617 MIR208A-201ENST00000362287 71 ntBASIC1.87□□□□□ -2.11
NPIPB3Q92617 MIR196B-201ENST00000384852 84 ntBASIC1.87□□□□□ -2.11
NPIPB3Q92617 Y_RNA.626-201ENST00000411288 95 ntBASIC1.87□□□□□ -2.11
NPIPB3Q92617 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms