Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC105245.1-201ENST00000581934 244 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 ZNF861P-201ENST00000588126 639 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 AL929325.1-201ENST00000603096 117 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 AL121890.5-201ENST00000620848 304 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.91□□□□□ -1.94
EPHB3P54753 AC008555.8-201ENST00000623602 2168 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
EPHB3P54753 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.91□□□□□ -1.94
EPHB3P54753 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.94
EPHB3P54753 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
EPHB3P54753 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
EPHB3P54753 RNU6-309P-201ENST00000364573 106 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 Y_RNA.346-201ENST00000365385 112 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RNU6-32P-201ENST00000383948 107 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RNU6-13P-201ENST00000384248 107 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 Y_RNA.495-201ENST00000384435 112 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RNU6-1235P-201ENST00000384559 107 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RNU6-12P-201ENST00000384604 107 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RNU6-41P-201ENST00000384741 107 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 MIR624-201ENST00000385217 97 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 SNORA26-201ENST00000391286 122 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 MIR887-201ENST00000401258 79 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RPL30P4-201ENST00000429309 333 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 AC016717.1-201ENST00000448918 286 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RNU6-498P-201ENST00000459468 107 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 MRPS36P2-201ENST00000512569 299 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 MIR449C-201ENST00000516047 92 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 RNU6-126P-201ENST00000516685 103 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 SNORA31.26-201ENST00000517250 137 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 AC027419.1-201ENST00000522976 328 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 AC007536.1-201ENST00000533382 349 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.9□□□□□ -1.95
EPHB3P54753 MIR5582-201ENST00000579697 68 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 AC090115.4-201ENST00000609970 188 ntBASIC2.9□□□□□ -1.95
EPHB3P54753 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
EPHB3P54753 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.9□□□□□ -1.95
EPHB3P54753 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
EPHB3P54753 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
EPHB3P54753 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 Y_RNA.52-201ENST00000362760 96 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 RNU6-1138P-201ENST00000365359 106 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 MIR181A2-201ENST00000384863 110 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 MIR562-201ENST00000384894 95 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
EPHB3P54753 MIR891A-201ENST00000401237 79 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 AC016909.1-201ENST00000415916 166 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 AC008134.1-201ENST00000420943 193 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.89□□□□□ -1.95
EPHB3P54753 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.89□□□□□ -1.95
EPHB3P54753 AC023449.1-201ENST00000454464 154 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 Y_RNA.649-201ENST00000459077 103 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 RNU6-948P-201ENST00000516374 107 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 RNU1-104P-201ENST00000517280 175 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 RPL23AP91-201ENST00000569211 455 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 AC103810.1-201ENST00000579873 453 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 AL365205.2-201ENST00000594586 68 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 AC090517.3-201ENST00000625170 141 ntBASIC2.89□□□□□ -1.95
EPHB3P54753 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
EPHB3P54753 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
EPHB3P54753 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
EPHB3P54753 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
EPHB3P54753 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
EPHB3P54753 RNU6-508P-201ENST00000363231 103 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 Y_RNA.796-201ENST00000364268 102 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 Y_RNA.799-201ENST00000364992 102 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 RNU6-1274P-201ENST00000384557 107 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 U6atac.2-201ENST00000408644 118 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 MTCO1P44-201ENST00000441935 243 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 AC096725.1-201ENST00000514266 313 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 MIR4662B-201ENST00000579498 81 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.88□□□□□ -1.95
EPHB3P54753 AC025166.1-201ENST00000612411 163 ntBASIC2.88□□□□□ -1.95
EPHB3P54753 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
EPHB3P54753 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.87□□□□□ -1.95
EPHB3P54753 RNU1-22P-201ENST00000363334 158 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 RNU6-944P-201ENST00000364023 107 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 Y_RNA.369-201ENST00000365568 117 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 RPL21P3-201ENST00000395517 478 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 RNA5SP127-201ENST00000411051 133 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 RPS4XP11-201ENST00000446897 772 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 AL031737.1-201ENST00000450125 223 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 RPS29P24-201ENST00000486345 171 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 RNA5SP112-201ENST00000515937 99 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 RNU2-34P-201ENST00000516534 121 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 AC007751.1-201ENST00000529260 376 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 AC018630.3-201ENST00000542637 96 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 AL022345.2-201ENST00000606307 135 ntBASIC2.87□□□□□ -1.95
EPHB3P54753 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.87□□□□□ -1.95
EPHB3P54753 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
EPHB3P54753 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
EPHB3P54753 MIR450A1-201ENST00000362262 91 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 Y_RNA.66-201ENST00000362862 102 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 SNORA68.1-201ENST00000364537 132 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 RNA5SP344-201ENST00000411081 104 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 AC080013.2-201ENST00000460866 323 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 RN7SL75P-201ENST00000461926 281 ntBASIC2.86□□□□□ -1.95
EPHB3P54753 RPS27P22-201ENST00000478056 241 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms