Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-94P-201ENST00000607728 107 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 AL359075.3-201ENST00000613288 217 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 MIR376A2-201ENST00000636782 80 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 ZNF271P-202ENST00000465539 1970 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 Y_RNA.49-201ENST00000362714 112 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 U8.6-201ENST00000364939 135 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 Y_RNA.323-201ENST00000365157 109 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NFKB1P19838 RNU6-1014P-201ENST00000383940 103 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 AL117342.1-201ENST00000404861 406 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 RPS26P48-201ENST00000491713 339 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 Y_RNA.714-201ENST00000517065 90 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.28□□□□□ -1.88
NFKB1P19838 AL591926.4-201ENST00000616895 298 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NFKB1P19838 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.28□□□□□ -1.88
NFKB1P19838 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NFKB1P19838 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
NFKB1P19838 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
NFKB1P19838 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
NFKB1P19838 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NFKB1P19838 MIR126-201ENST00000362291 85 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 SNORD73B-201ENST00000364394 72 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 RNA5SP293-201ENST00000410527 113 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
NFKB1P19838 AL353689.1-201ENST00000438895 199 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 RPL39P34-201ENST00000477141 156 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 CKS1BP2-201ENST00000497342 240 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 MIR2682-201ENST00000580305 110 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 AL356280.1-201ENST00000603614 379 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.27□□□□□ -1.89
NFKB1P19838 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NFKB1P19838 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.27□□□□□ -1.89
NFKB1P19838 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NFKB1P19838 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.26□□□□□ -1.89
NFKB1P19838 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NFKB1P19838 SNORA63.1-201ENST00000362493 131 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 Y_RNA.198-201ENST00000364013 98 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 Y_RNA.267-201ENST00000364679 109 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 RNA5SP467-201ENST00000391274 118 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 AL590004.2-201ENST00000404787 371 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.26□□□□□ -1.89
NFKB1P19838 SEM1P1-201ENST00000506694 209 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 RNU6-240P-201ENST00000516098 97 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 RNA5SP281-201ENST00000516504 135 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 AL353149.1-201ENST00000610667 244 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 uc_338.25-201ENST00000613756 156 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 MIR7975-201ENST00000619350 68 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 MIR338-201ENST00000636369 67 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 U6.108-201ENST00000637764 58 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NFKB1P19838 AL589743.1-201ENST00000551932 2712 ntBASIC3.26□□□□□ -1.89
NFKB1P19838 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NFKB1P19838 SNORA63.5-201ENST00000363548 123 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 SNORA68.1-201ENST00000364537 132 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 RNU6-294P-201ENST00000364999 102 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 MIR522-201ENST00000385071 87 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NFKB1P19838 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 FTH1P12-201ENST00000432137 551 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 RNA5SP217-201ENST00000515959 91 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.25□□□□□ -1.89
NFKB1P19838 AC091544.4-201ENST00000555268 342 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 AC022217.4-201ENST00000604389 163 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 AC019176.2-201ENST00000611579 315 ntBASIC3.25□□□□□ -1.89
NFKB1P19838 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NFKB1P19838 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
NFKB1P19838 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NFKB1P19838 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NFKB1P19838 Y_RNA.410-201ENST00000383992 113 ntBASIC3.24□□□□□ -1.89
NFKB1P19838 RNU6-1113P-201ENST00000384348 107 ntBASIC3.24□□□□□ -1.89
NFKB1P19838 SNORA51.10-201ENST00000384418 136 ntBASIC3.24□□□□□ -1.89
NFKB1P19838 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
NFKB1P19838 RNU6-1041P-201ENST00000516254 102 ntBASIC3.24□□□□□ -1.89
NFKB1P19838 AC008739.3-201ENST00000603262 127 ntBASIC3.24□□□□□ -1.89
NFKB1P19838 AC134878.1-201ENST00000619901 243 ntBASIC3.24□□□□□ -1.89
NFKB1P19838 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NFKB1P19838 RNY4P6-201ENST00000363667 96 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 CD24P4-201ENST00000382840 243 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 MIR548O-201ENST00000408583 114 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 RPL32P35-201ENST00000415214 394 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 EDDM3CP-201ENST00000415977 425 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 SNORA40.13-201ENST00000516379 120 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.23□□□□□ -1.89
NFKB1P19838 AC004486.1-201ENST00000546846 233 ntBASIC3.23□□□□□ -1.89
NFKB1P19838 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NFKB1P19838 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NFKB1P19838 SNORA1B-201ENST00000362535 133 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 Y_RNA.213-201ENST00000364178 111 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 RNU6-1131P-201ENST00000364955 107 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 Y_RNA.362-201ENST00000365518 110 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 Y_RNA.544-201ENST00000384650 113 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 MIR483-201ENST00000385070 76 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 MIR181B1-201ENST00000385240 110 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 AC005326.1-201ENST00000429197 123 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 PRSS3P4-201ENST00000453323 162 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 AC023141.11-201ENST00000508864 202 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms