Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR4272-201ENST00000635924 64 ntBASIC1.08□□□□□ -2.24
NKX2-6A6NCS4 SNORD1A-201ENST00000364968 72 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 RNY3P4-201ENST00000384428 101 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 MIR194-1-201ENST00000384892 85 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 AL161935.2-201ENST00000414627 60 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 FCF1P4-201ENST00000448326 183 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 AC091021.1-201ENST00000468051 388 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 RNU4-77P-201ENST00000516692 156 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 MIR2355-201ENST00000517199 87 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 SUMO2P16-201ENST00000519475 264 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 LARP7P1-201ENST00000605576 316 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 SNORD58B-201ENST00000607313 66 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 AC240442.1-201ENST00000616055 283 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 AC091812.1-201ENST00000432235 1948 ntBASIC1.07□□□□□ -2.24
NKX2-6A6NCS4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 MIR410-201ENST00000362222 80 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.31-201ENST00000362574 102 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 RNU6-867P-201ENST00000364956 107 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.394-201ENST00000383942 103 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 MIR7-2-201ENST00000384970 110 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 MRPL42P3-201ENST00000401492 326 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 MIR5188-201ENST00000583467 113 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 AL390123.1-201ENST00000603216 237 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 AC006157.1-201ENST00000611750 366 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 AC091925.1-201ENST00000623204 462 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 MIR6079-201ENST00000635807 62 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 AC018630.2-201ENST00000534866 2403 ntBASIC1.06□□□□□ -2.24
NKX2-6A6NCS4 MIR302D-201ENST00000362275 68 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 SNORD115-30-201ENST00000364117 82 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 RNU5E-4P-201ENST00000364931 120 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 RNU6-376P-201ENST00000384731 106 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 SNORD78.2-201ENST00000391076 69 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 MRPL35P1-201ENST00000404272 572 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 MTCO3P19-201ENST00000415864 321 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AL137792.2-201ENST00000443484 235 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 STAG3L5P-204ENST00000443759 179 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC233266.1-201ENST00000454518 96 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 RPS29P29-201ENST00000456396 171 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 RNU2-12P-201ENST00000517216 168 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 VN1R91P-201ENST00000594377 169 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AL365434.2-201ENST00000607979 234 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC242852.1-201ENST00000612151 96 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC022709.1-201ENST00000615967 87 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 MIR6515-201ENST00000619843 57 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC244015.1-201ENST00000622301 99 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC127459.3-201ENST00000624328 466 ntBASIC1.05□□□□□ -2.24
NKX2-6A6NCS4 AC005592.1-201ENST00000566527 1640 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 RNA5SP259-201ENST00000365541 109 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.509-201ENST00000384506 99 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 MT-TD-201ENST00000387419 68 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 MIR873-201ENST00000401120 77 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 RNA5SP511-201ENST00000410487 115 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AL160004.2-201ENST00000432935 350 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 RPS26P55-201ENST00000471178 356 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 RN7SKP179-201ENST00000516126 217 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 RNU6-155P-201ENST00000516347 100 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 MIR4778-201ENST00000577635 80 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AC015688.6-201ENST00000577737 104 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AC005176.2-201ENST00000596933 147 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 C8orf59P2-201ENST00000603441 271 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AL080274.1-201ENST00000605565 220 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AC005828.6-201ENST00000606610 232 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AL050343.2-201ENST00000607338 280 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 AC106754.2-201ENST00000623006 233 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.04□□□□□ -2.24
NKX2-6A6NCS4 SNORA1B-201ENST00000362535 133 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RNU6-324P-201ENST00000363957 106 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.252-201ENST00000364556 101 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RNU6-117P-201ENST00000365415 107 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 SNORD116-13-201ENST00000384408 92 ntBASIC1.03□□□□□ -2.24
NKX2-6A6NCS4 RNU6-505P-201ENST00000384427 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms