Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC134503.1-201ENST00000633048 54 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 MIR219B-201ENST00000637023 88 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.394-201ENST00000383942 103 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 RNA5SP511-201ENST00000410487 115 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 STAG3L5P-204ENST00000443759 179 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 AC079140.2-201ENST00000506193 142 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 RNU2-56P-201ENST00000516826 190 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 RNU6-988P-201ENST00000519081 107 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 AL358944.1-201ENST00000528537 144 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.783-201ENST00000613546 102 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 AC073349.3-201ENST00000617616 186 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 AL513423.1-201ENST00000621695 132 ntBASIC1.6□□□□□ -2.15
CMTM3Q96MX0 SNORA1B-201ENST00000362535 133 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.148-201ENST00000363557 117 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.551-201ENST00000384661 102 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 MIR513A1-201ENST00000385138 129 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 AC019129.1-201ENST00000403786 261 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 Z98742.3-201ENST00000418637 326 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 AL445646.1-201ENST00000431784 216 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 AL162725.1-201ENST00000435405 301 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.59□□□□□ -2.15
CMTM3Q96MX0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.59□□□□□ -2.15
CMTM3Q96MX0 RNA5SP445-201ENST00000515889 115 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 AC022616.4-201ENST00000522985 181 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 AC015720.1-201ENST00000565251 277 ntBASIC1.59□□□□□ -2.15
CMTM3Q96MX0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CMTM3Q96MX0 U8.2-201ENST00000363156 134 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.138-201ENST00000363462 102 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 SNORA63.7-201ENST00000365579 123 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.58□□□□□ -2.16
CMTM3Q96MX0 RNU6-937P-201ENST00000384325 106 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.645-201ENST00000391229 102 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 AL354751.2-201ENST00000415471 210 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 MTCO2P12-201ENST00000427426 682 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 AC027119.1-201ENST00000440877 241 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 SNORA59A-201ENST00000459326 152 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 RNU7-110P-201ENST00000516891 62 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.58□□□□□ -2.16
CMTM3Q96MX0 AC124312.5-201ENST00000604451 268 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 PART1_1.1-201ENST00000611761 217 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 AC040896.1-201ENST00000613819 479 ntBASIC1.58□□□□□ -2.16
CMTM3Q96MX0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.58□□□□□ -2.16
CMTM3Q96MX0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
CMTM3Q96MX0 RNA5SP482-201ENST00000391269 118 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 RNU6-710P-201ENST00000410424 105 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 RNU6-130P-201ENST00000411112 103 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
CMTM3Q96MX0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.57□□□□□ -2.16
CMTM3Q96MX0 AC233266.1-201ENST00000454518 96 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 AL049830.1-201ENST00000468034 425 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 RNU6-902P-201ENST00000517212 91 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 SUMO2P16-201ENST00000519475 264 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.57□□□□□ -2.16
CMTM3Q96MX0 AC104695.3-201ENST00000604052 296 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 AC242852.1-201ENST00000612151 96 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 AC244015.1-201ENST00000622301 99 ntBASIC1.57□□□□□ -2.16
CMTM3Q96MX0 SNORD81.1-201ENST00000363064 77 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 RNU4-13P-201ENST00000364019 141 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 RNA5SP259-201ENST00000365541 109 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 SNORD116-13-201ENST00000384408 92 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 RNU6-823P-201ENST00000391042 103 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 MIR548P-201ENST00000408336 84 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.56□□□□□ -2.16
CMTM3Q96MX0 OR9P1P-201ENST00000496431 281 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.711-201ENST00000516993 102 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.721-201ENST00000517207 102 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 PRR13P7-201ENST00000605538 430 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.56□□□□□ -2.16
CMTM3Q96MX0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 MIR660-201ENST00000385235 97 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 RNU6-101P-201ENST00000410323 104 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 RPL30P13-201ENST00000418873 348 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.55□□□□□ -2.16
CMTM3Q96MX0 RPS4XP11-201ENST00000446897 772 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 RNA5SP168-201ENST00000516642 112 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 Y_RNA.715-201ENST00000517082 110 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 MIR3937-201ENST00000580135 106 ntBASIC1.55□□□□□ -2.16
CMTM3Q96MX0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.55□□□□□ -2.16
CMTM3Q96MX0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.55□□□□□ -2.16
CMTM3Q96MX0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.55□□□□□ -2.16
CMTM3Q96MX0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CMTM3Q96MX0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.54□□□□□ -2.16
CMTM3Q96MX0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CMTM3Q96MX0 SNORA22B-201ENST00000383876 138 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
CMTM3Q96MX0 RNU6-21P-201ENST00000384710 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms