Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 AC099677.2-201ENST00000436385 175 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 AC003982.1-202ENST00000469928 248 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 AC117454.1-201ENST00000491120 168 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 RNU7-99P-201ENST00000516271 62 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 SNORA9.3-201ENST00000516383 129 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 AC069114.2-201ENST00000604699 304 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 AC245884.12-201ENST00000615364 59 ntBASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SYNPOQ8N3V7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 Y_RNA.29-201ENST00000362570 113 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 Y_RNA.76-201ENST00000362931 109 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 Y_RNA.200-201ENST00000364018 102 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 MIR515-2-201ENST00000384883 83 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 MIR515-1-201ENST00000384884 83 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 SNORA26.5-201ENST00000391215 123 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 SNORA3.2-201ENST00000408221 125 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 MIR1298-201ENST00000408783 112 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 AC233266.1-201ENST00000454518 96 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 U8.19-201ENST00000459095 133 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 SNORA31.25-201ENST00000517242 134 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 AC005972.2-201ENST00000604690 348 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 AC004832.4-201ENST00000608952 331 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 AC242852.1-201ENST00000612151 96 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 AC004792.1-201ENST00000614523 137 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 MIR7843-201ENST00000622274 79 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 AC244015.1-201ENST00000622301 99 ntBASIC2.66□□□□□ -1.98
SYNPOQ8N3V7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
SYNPOQ8N3V7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 AC018634.1-201ENST00000437554 401 ntBASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 MTND2P29-201ENST00000438595 412 ntBASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 snoU13.15-201ENST00000459407 104 ntBASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 AL163195.1-201ENST00000496941 348 ntBASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 AC022513.1-201ENST00000624512 117 ntBASIC2.65□□□□□ -1.99
SYNPOQ8N3V7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.217-201ENST00000364214 105 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNU6-211P-201ENST00000384047 107 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 SNORA72.4-201ENST00000384174 132 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 SNORD23.1-201ENST00000408212 104 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNA5SP425-201ENST00000410336 112 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNU2-7P-201ENST00000410794 178 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNU4-53P-201ENST00000410828 140 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNA5SP501-201ENST00000410990 112 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNU7-141P-201ENST00000459304 62 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.641-201ENST00000459414 105 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNA5SP57-201ENST00000459463 123 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RPS27AP9-201ENST00000477681 438 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RNVU1-2-201ENST00000516326 135 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 AC015720.1-201ENST00000565251 277 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 POLR3GP1-201ENST00000594073 261 ntBASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SYNPOQ8N3V7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.150-201ENST00000363562 102 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.180-201ENST00000363867 113 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 RNU11-5P-201ENST00000391216 129 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.637-201ENST00000459424 114 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 AC091021.1-201ENST00000468051 388 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 CBX3P4-201ENST00000538909 354 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 AL008718.3-201ENST00000610217 321 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 AC012640.5-201ENST00000623897 319 ntBASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SYNPOQ8N3V7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.83-201ENST00000363005 113 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 RNU6-899P-201ENST00000363947 107 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 U8.7-201ENST00000364940 136 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 RNU6-117P-201ENST00000365415 107 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 PCNPP3-201ENST00000393579 471 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 RNA5SP450-201ENST00000411206 102 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 AL356320.1-201ENST00000429616 163 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 AL162725.1-201ENST00000435405 301 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 AC104332.1-201ENST00000440471 797 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 RPL23AP54-201ENST00000495129 419 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 SNORD116-28-201ENST00000516123 91 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms