Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC069294.1-201ENST00000608397 350 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 AC046143.2-201ENST00000609789 160 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 AL137847.3-201ENST00000611521 109 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.73□□□□□ -1.97
KRT40Q6A162 Y_RNA.4-201ENST00000362333 112 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 Y_RNA.8-201ENST00000362353 102 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 RNY1P5-201ENST00000383890 115 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 RNU6-418P-201ENST00000384035 107 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 MIR873-201ENST00000401120 77 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 AL355497.1-201ENST00000406262 551 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 AC007064.1-201ENST00000412238 351 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 AL135786.1-201ENST00000415892 214 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 HMGN2P18-201ENST00000450680 270 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 RPS20P10-201ENST00000451209 253 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.72□□□□□ -1.97
KRT40Q6A162 AC021269.2-201ENST00000532318 330 ntBASIC2.72□□□□□ -1.97
KRT40Q6A162 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.72□□□□□ -1.97
KRT40Q6A162 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.72□□□□□ -1.97
KRT40Q6A162 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRT40Q6A162 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
KRT40Q6A162 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
KRT40Q6A162 SNORD114-7-201ENST00000362520 77 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 SNORA27.1-201ENST00000362604 124 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 SNORD114-1-201ENST00000362705 72 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 Y_RNA.75-201ENST00000362927 97 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 RNU6-1130P-201ENST00000365434 107 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 HMGN2P23-201ENST00000456759 269 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 AC080013.2-201ENST00000460866 323 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 AC010531.2-201ENST00000465012 153 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 CKS1BP2-201ENST00000497342 240 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 AC234781.5-201ENST00000508429 271 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 RNU6-1337P-201ENST00000516525 95 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 AC025647.1-201ENST00000517879 253 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 AC108706.1-201ENST00000611053 297 ntBASIC2.71□□□□□ -1.98
KRT40Q6A162 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KRT40Q6A162 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
KRT40Q6A162 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
KRT40Q6A162 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.7□□□□□ -1.98
KRT40Q6A162 MIR340-201ENST00000362125 95 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 Y_RNA.121-201ENST00000363309 113 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 RNU6-899P-201ENST00000363947 107 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 SNORA19-201ENST00000384737 128 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 MIR626-201ENST00000385032 94 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 RNU6-220P-201ENST00000390919 107 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 RNU2-32P-201ENST00000411193 191 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 RPS26P55-201ENST00000471178 356 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.7□□□□□ -1.98
KRT40Q6A162 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.7□□□□□ -1.98
KRT40Q6A162 AC023141.11-201ENST00000508864 202 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 SCARNA8-201ENST00000515924 131 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 SNORA70.12-201ENST00000516084 153 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 RNU6-789P-201ENST00000517105 102 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 AC022616.8-201ENST00000533569 253 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 MIR3684-201ENST00000579779 74 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 AC004832.4-201ENST00000608952 331 ntBASIC2.7□□□□□ -1.98
KRT40Q6A162 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.7□□□□□ -1.98
KRT40Q6A162 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
KRT40Q6A162 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
KRT40Q6A162 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
KRT40Q6A162 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
KRT40Q6A162 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRT40Q6A162 Y_RNA.182-201ENST00000363880 111 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 Y_RNA.272-201ENST00000364696 102 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 Y_RNA.293-201ENST00000364908 93 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 U8.7-201ENST00000364940 136 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 RNU6-546P-201ENST00000383991 107 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 RPS15AP28-201ENST00000435088 386 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 AL161788.1-201ENST00000441805 169 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 AC114982.1-201ENST00000469402 321 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 RNU6-453P-201ENST00000516819 85 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 MIR5739-201ENST00000619803 80 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KRT40Q6A162 AL159152.1-201ENST00000635019 2587 ntBASIC2.69□□□□□ -1.98
KRT40Q6A162 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
KRT40Q6A162 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
KRT40Q6A162 Y_RNA.23-201ENST00000362496 106 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 Y_RNA.338-201ENST00000365320 114 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 RNU6-1235P-201ENST00000384559 107 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 SEPT7P4-201ENST00000437076 306 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 AC018634.1-201ENST00000437554 401 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
KRT40Q6A162 MTCO1P44-201ENST00000441935 243 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.68□□□□□ -1.98
KRT40Q6A162 HSPE1P13-201ENST00000451143 297 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 RNU6-498P-201ENST00000459468 107 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 AC010598.1-201ENST00000510378 103 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 RNA5SP281-201ENST00000516504 135 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 SNORA48.11-201ENST00000517015 89 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 RNA5SP490-201ENST00000517141 136 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 AC027419.1-201ENST00000522976 328 ntBASIC2.68□□□□□ -1.98
KRT40Q6A162 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.68□□□□□ -1.98
KRT40Q6A162 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRT40Q6A162 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.67□□□□□ -1.98
KRT40Q6A162 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
KRT40Q6A162 AL356292.1-201ENST00000283110 373 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 Y_RNA.24-201ENST00000362508 103 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 RNU6-818P-201ENST00000364837 108 ntBASIC2.67□□□□□ -1.98
KRT40Q6A162 RNU6-275P-201ENST00000364910 107 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms