Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-1301P-201ENST00000362724 104 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SCN4AP35499 Y_RNA.415-201ENST00000384012 112 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 RNU6-793P-201ENST00000384233 104 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 MRPL35P1-201ENST00000404272 572 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN4AP35499 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN4AP35499 AC107399.1-201ENST00000451226 265 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 RNU6-1114P-201ENST00000516022 107 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 RNU6-307P-201ENST00000516743 106 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 AL512310.8-201ENST00000550183 120 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 AL390123.1-201ENST00000603216 237 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 HSPE1P19-201ENST00000603327 295 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 AC243829.6-201ENST00000612652 106 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 MIR8063-201ENST00000621930 81 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 AC243829.3-201ENST00000622177 108 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN4AP35499 RNU6-1084P-201ENST00000362498 107 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 U3.8-201ENST00000363675 217 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 RNU6-961P-201ENST00000363893 105 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 RNU6-407P-201ENST00000365280 104 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 Y_RNA.405-201ENST00000383979 100 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 Y_RNA.451-201ENST00000384200 100 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 Y_RNA.524-201ENST00000384564 100 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 Y_RNA.557-201ENST00000384680 107 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 Y_RNA.561-201ENST00000384694 100 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN4AP35499 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN4AP35499 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN4AP35499 AC023157.2-201ENST00000540596 141 ntBASIC0.82□□□□□ -2.28
SCN4AP35499 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN4AP35499 RNA5SP499-201ENST00000363982 119 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 RNY3P4-201ENST00000384428 101 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 MIR329-1-201ENST00000385028 80 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 RNA5SP127-201ENST00000411051 133 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 AC027119.1-201ENST00000440877 241 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN4AP35499 AC091021.1-201ENST00000468051 388 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 RPL7P42-201ENST00000481005 679 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 RNU11-2P-201ENST00000516898 142 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 MTND4LP26-201ENST00000518144 282 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 AC004812.1-201ENST00000540773 146 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 MIR5690-201ENST00000583739 73 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 AL513534.2-201ENST00000603836 250 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 TPTEP1-208ENST00000636884 213 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 AC100810.6-201ENST00000638068 285 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 MTND4P12-201ENST00000498999 1377 ntBASIC0.81□□□□□ -2.28
SCN4AP35499 Y_RNA.184-201ENST00000363884 108 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNU6-505P-201ENST00000384427 107 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 Y_RNA.594-201ENST00000410373 140 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNA5SP504-201ENST00000410676 117 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.8□□□□□ -2.28
SCN4AP35499 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN4AP35499 MIR2053-201ENST00000459295 91 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.8□□□□□ -2.28
SCN4AP35499 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 AC073544.1-201ENST00000600110 1595 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
SCN4AP35499 RNU6-324P-201ENST00000363957 106 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 SNORA4.2-201ENST00000365313 147 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNA5SP511-201ENST00000410487 115 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 Y_RNA.599-201ENST00000410489 109 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 SNX2P2-201ENST00000424553 323 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 FCF1P4-201ENST00000448326 183 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 AC117454.1-201ENST00000491120 168 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNU6-470P-201ENST00000515954 104 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNU1-117P-201ENST00000517041 158 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RNU6-165P-201ENST00000517170 99 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 RPL21P9-201ENST00000556149 474 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 MIR4790-201ENST00000577799 79 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 MIR5695-201ENST00000579717 85 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 AC100812.1-201ENST00000607622 580 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 AC022306.2-201ENST00000617563 647 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 AC087588.2-201ENST00000617667 426 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 AC027335.2-201ENST00000624030 375 ntBASIC0.8□□□□□ -2.28
SCN4AP35499 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 RNU6-1123P-201ENST00000362347 106 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 Y_RNA.243-201ENST00000364481 109 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 Y_RNA.364-201ENST00000365532 101 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 SNORA25-201ENST00000384384 134 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 RNU6-376P-201ENST00000384731 106 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 AC114482.1-201ENST00000418010 247 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN4AP35499 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN4AP35499 SCARNA16.2-201ENST00000516520 172 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 AC134698.4-201ENST00000523451 826 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 AP002001.1-203ENST00000534002 267 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 AC090049.2-201ENST00000550377 109 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 AC018448.1-201ENST00000552843 316 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
SCN4AP35499 U6atac.1-201ENST00000616025 117 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 U6.115-201ENST00000636045 103 ntBASIC0.79□□□□□ -2.28
SCN4AP35499 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 253.9 ms