Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 Y_RNA.415-201ENST00000384012 112 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 SNORA67.2-201ENST00000384300 149 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 AC004386.2-201ENST00000441858 148 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 AC145146.1-201ENST00000496370 254 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 RNU1-40P-201ENST00000516816 164 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 RNU1-97P-201ENST00000516872 164 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 AC022559.1-201ENST00000520905 205 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.26□□□□□ -2.05
TNFRSF8P28908 AC005562.2-201ENST00000618264 111 ntBASIC2.26□□□□□ -2.05
TNFRSF8P28908 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TNFRSF8P28908 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
TNFRSF8P28908 MIR337-201ENST00000362281 93 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 RNU1-72P-201ENST00000362976 153 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 RNU4-80P-201ENST00000363200 141 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 RNU6-1020P-201ENST00000363684 107 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 SNORA25B-201ENST00000365507 128 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 Y_RNA.435-201ENST00000384095 112 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 MIR499A-201ENST00000384903 122 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 AC027124.2-201ENST00000428249 105 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 RNU6-436P-201ENST00000516171 114 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 RNU6-155P-201ENST00000516347 100 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 AC087441.2-201ENST00000529141 262 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
TNFRSF8P28908 MIR3145-201ENST00000580727 82 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 MIR4448-201ENST00000584360 86 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 AC005828.6-201ENST00000606610 232 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 AC012640.5-201ENST00000623897 319 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 snoU18.1-201ENST00000629629 71 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 U6.106-201ENST00000636360 105 ntBASIC2.25□□□□□ -2.05
TNFRSF8P28908 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
TNFRSF8P28908 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 RNA5SP160-201ENST00000364866 120 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 Y_RNA.304-201ENST00000365011 112 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 MIR518E-201ENST00000385252 88 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 RNU6-493P-201ENST00000391321 108 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 Y_RNA.597-201ENST00000410463 100 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 RNA5SP475-201ENST00000410568 110 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 EDDM3CP-201ENST00000415977 425 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.24□□□□□ -2.05
TNFRSF8P28908 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.24□□□□□ -2.05
TNFRSF8P28908 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 AC074198.2-201ENST00000508153 258 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.24□□□□□ -2.05
TNFRSF8P28908 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.24□□□□□ -2.05
TNFRSF8P28908 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.24□□□□□ -2.05
TNFRSF8P28908 AC007229.1-201ENST00000590455 412 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 DEFB117-201ENST00000602356 141 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 SNORD11B-201ENST00000607707 90 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 AC068205.3-201ENST00000636385 468 ntBASIC2.24□□□□□ -2.05
TNFRSF8P28908 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFRSF8P28908 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
TNFRSF8P28908 RNU6-653P-201ENST00000363074 106 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 RNU6-774P-201ENST00000363238 107 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 Y_RNA.233-201ENST00000364407 101 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 Y_RNA.240-201ENST00000364469 95 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 SNORA18.2-201ENST00000383865 132 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 RNU6-211P-201ENST00000384047 107 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 RN7SKP51-201ENST00000410781 304 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.23□□□□□ -2.05
TNFRSF8P28908 RNY3P16-201ENST00000516338 101 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 RNU2-44P-201ENST00000516795 194 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 RNU6-789P-201ENST00000517105 102 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.23□□□□□ -2.05
TNFRSF8P28908 NDUFA5P6-201ENST00000542110 379 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.23□□□□□ -2.05
TNFRSF8P28908 MIR4308-201ENST00000580634 81 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 MIR3935-201ENST00000583472 104 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 AC090517.3-201ENST00000625170 141 ntBASIC2.23□□□□□ -2.05
TNFRSF8P28908 snoU2_19.1-201ENST00000362361 80 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 RNU6-1272P-201ENST00000362776 107 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 SNORD32B-201ENST00000364460 84 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 Y_RNA.243-201ENST00000364481 109 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 SNORD87-201ENST00000364849 89 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 Y_RNA.329-201ENST00000365209 107 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 RNU6-125P-201ENST00000384505 107 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 MIR29C-201ENST00000385231 88 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 AL355497.1-201ENST00000406262 551 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 snoU13.18-201ENST00000459483 104 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 AP005660.1-201ENST00000522972 293 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.22□□□□□ -2.05
TNFRSF8P28908 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.22□□□□□ -2.05
TNFRSF8P28908 MIR5692C2-201ENST00000577959 77 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 MIR5006-201ENST00000583027 110 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 AL008718.3-201ENST00000610217 321 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 AL365265.1-201ENST00000621045 234 ntBASIC2.22□□□□□ -2.05
TNFRSF8P28908 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
TNFRSF8P28908 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TNFRSF8P28908 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
TNFRSF8P28908 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.05
TNFRSF8P28908 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TNFRSF8P28908 AL157777.2-201ENST00000258070 137 ntBASIC2.21□□□□□ -2.06
TNFRSF8P28908 Y_RNA.262-201ENST00000364641 102 ntBASIC2.21□□□□□ -2.06
TNFRSF8P28908 RNU6-923P-201ENST00000364753 107 ntBASIC2.21□□□□□ -2.06
TNFRSF8P28908 RNU6-546P-201ENST00000383991 107 ntBASIC2.21□□□□□ -2.06
TNFRSF8P28908 Y_RNA.506-201ENST00000384494 102 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms