Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC027419.1-201ENST00000522976 328 ntBASIC0.64□□□□□ -2.31
THRAP10827 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.64□□□□□ -2.31
THRAP10827 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.64□□□□□ -2.31
THRAP10827 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
THRAP10827 MIR3684-201ENST00000579779 74 ntBASIC0.64□□□□□ -2.31
THRAP10827 RN7SL793P-201ENST00000583259 296 ntBASIC0.64□□□□□ -2.31
THRAP10827 AL512605.2-201ENST00000592972 256 ntBASIC0.64□□□□□ -2.31
THRAP10827 AL117336.2-201ENST00000602435 335 ntBASIC0.64□□□□□ -2.31
THRAP10827 AC005014.2-201ENST00000607795 599 ntBASIC0.64□□□□□ -2.31
THRAP10827 MIR6779-201ENST00000617283 64 ntBASIC0.64□□□□□ -2.31
THRAP10827 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.64□□□□□ -2.31
THRAP10827 MTND5P16-201ENST00000460269 1703 ntBASIC0.64□□□□□ -2.31
THRAP10827 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.64□□□□□ -2.31
THRAP10827 SNORA1B-201ENST00000362535 133 ntBASIC0.63□□□□□ -2.31
THRAP10827 SNORA27.1-201ENST00000362604 124 ntBASIC0.63□□□□□ -2.31
THRAP10827 Y_RNA.361-201ENST00000365515 120 ntBASIC0.63□□□□□ -2.31
THRAP10827 Y_RNA.490-201ENST00000384413 102 ntBASIC0.63□□□□□ -2.31
THRAP10827 MIR181A1-201ENST00000385026 110 ntBASIC0.63□□□□□ -2.31
THRAP10827 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
THRAP10827 RNA5SP482-201ENST00000391269 118 ntBASIC0.63□□□□□ -2.31
THRAP10827 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
THRAP10827 RNU6-1001P-201ENST00000411265 100 ntBASIC0.63□□□□□ -2.31
THRAP10827 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.63□□□□□ -2.31
THRAP10827 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.63□□□□□ -2.31
THRAP10827 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.63□□□□□ -2.31
THRAP10827 RNU7-175P-201ENST00000515915 61 ntBASIC0.63□□□□□ -2.31
THRAP10827 RNU7-12P-201ENST00000516030 62 ntBASIC0.63□□□□□ -2.31
THRAP10827 RNU6-341P-201ENST00000516973 96 ntBASIC0.63□□□□□ -2.31
THRAP10827 AP003716.2-201ENST00000528260 108 ntBASIC0.63□□□□□ -2.31
THRAP10827 AC109635.3-201ENST00000529536 185 ntBASIC0.63□□□□□ -2.31
THRAP10827 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.63□□□□□ -2.31
THRAP10827 AC068700.1-201ENST00000565862 3754 ntBASIC0.63□□□□□ -2.31
THRAP10827 Y_RNA.89-201ENST00000363031 102 ntBASIC0.62□□□□□ -2.31
THRAP10827 MIR526A1-201ENST00000384897 85 ntBASIC0.62□□□□□ -2.31
THRAP10827 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
THRAP10827 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
THRAP10827 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.62□□□□□ -2.31
THRAP10827 LINC01399-202ENST00000458450 244 ntBASIC0.62□□□□□ -2.31
THRAP10827 AC018710.1-201ENST00000506509 158 ntBASIC0.62□□□□□ -2.31
THRAP10827 AC026782.1-201ENST00000512952 449 ntBASIC0.62□□□□□ -2.31
THRAP10827 Y_RNA.683-201ENST00000516508 93 ntBASIC0.62□□□□□ -2.31
THRAP10827 RNU6-107P-201ENST00000516643 102 ntBASIC0.62□□□□□ -2.31
THRAP10827 AC105029.1-201ENST00000520250 669 ntBASIC0.62□□□□□ -2.31
THRAP10827 AP002004.2-201ENST00000531656 154 ntBASIC0.62□□□□□ -2.31
THRAP10827 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.62□□□□□ -2.31
THRAP10827 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.62□□□□□ -2.31
THRAP10827 EIF1P4-201ENST00000572664 335 ntBASIC0.62□□□□□ -2.31
THRAP10827 AC004832.4-201ENST00000608952 331 ntBASIC0.62□□□□□ -2.31
THRAP10827 AL096861.1-201ENST00000610899 123 ntBASIC0.62□□□□□ -2.31
THRAP10827 U6.115-201ENST00000636045 103 ntBASIC0.62□□□□□ -2.31
THRAP10827 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
THRAP10827 CASC19-280ENST00000642102 1351 ntBASIC0.61□□□□□ -2.31
THRAP10827 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.61□□□□□ -2.31
THRAP10827 Y_RNA.402-201ENST00000383972 102 ntBASIC0.61□□□□□ -2.31
THRAP10827 RNU6-318P-201ENST00000384283 103 ntBASIC0.61□□□□□ -2.31
THRAP10827 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.61□□□□□ -2.31
THRAP10827 AL137792.2-201ENST00000443484 235 ntBASIC0.61□□□□□ -2.31
THRAP10827 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
THRAP10827 RNU7-90P-201ENST00000459216 62 ntBASIC0.61□□□□□ -2.31
THRAP10827 RNU7-21P-201ENST00000459430 62 ntBASIC0.61□□□□□ -2.31
THRAP10827 MTND5P5-201ENST00000503764 376 ntBASIC0.61□□□□□ -2.31
THRAP10827 AC093534.1-201ENST00000504977 132 ntBASIC0.61□□□□□ -2.31
THRAP10827 SNORA70.12-201ENST00000516084 153 ntBASIC0.61□□□□□ -2.31
THRAP10827 RNU6-314P-201ENST00000516574 104 ntBASIC0.61□□□□□ -2.31
THRAP10827 RNU6-1116P-201ENST00000517269 99 ntBASIC0.61□□□□□ -2.31
THRAP10827 AC093023.1-201ENST00000547375 507 ntBASIC0.61□□□□□ -2.31
THRAP10827 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.61□□□□□ -2.31
THRAP10827 AC080013.6-201ENST00000606185 215 ntBASIC0.61□□□□□ -2.31
THRAP10827 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
THRAP10827 RNU6-1264P-201ENST00000383891 107 ntBASIC0.6□□□□□ -2.31
THRAP10827 Y_RNA.450-201ENST00000384198 113 ntBASIC0.6□□□□□ -2.31
THRAP10827 Y_RNA.473-201ENST00000384333 102 ntBASIC0.6□□□□□ -2.31
THRAP10827 Y_RNA.557-201ENST00000384680 107 ntBASIC0.6□□□□□ -2.31
THRAP10827 SNORA75.2-201ENST00000391138 150 ntBASIC0.6□□□□□ -2.31
THRAP10827 SNORA75.3-201ENST00000391231 150 ntBASIC0.6□□□□□ -2.31
THRAP10827 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
THRAP10827 AC016907.1-201ENST00000419483 435 ntBASIC0.6□□□□□ -2.31
THRAP10827 AC018865.2-201ENST00000423631 129 ntBASIC0.6□□□□□ -2.31
THRAP10827 USMG5P1-201ENST00000425964 177 ntBASIC0.6□□□□□ -2.31
THRAP10827 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.6□□□□□ -2.31
THRAP10827 RNA5SP20-201ENST00000515976 84 ntBASIC0.6□□□□□ -2.31
THRAP10827 AC245505.1-201ENST00000556398 224 ntBASIC0.6□□□□□ -2.31
THRAP10827 MIR3192-201ENST00000584920 77 ntBASIC0.6□□□□□ -2.31
THRAP10827 AC090517.2-201ENST00000614966 680 ntBASIC0.6□□□□□ -2.31
THRAP10827 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.6□□□□□ -2.31
THRAP10827 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
THRAP10827 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
THRAP10827 RNU4-41P-201ENST00000364426 143 ntBASIC0.59□□□□□ -2.31
THRAP10827 Y_RNA.243-201ENST00000364481 109 ntBASIC0.59□□□□□ -2.31
THRAP10827 Y_RNA.267-201ENST00000364679 109 ntBASIC0.59□□□□□ -2.31
THRAP10827 Y_RNA.339-201ENST00000365325 102 ntBASIC0.59□□□□□ -2.31
THRAP10827 SNORD116-13-201ENST00000384408 92 ntBASIC0.59□□□□□ -2.31
THRAP10827 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
THRAP10827 MIR190B-201ENST00000401119 79 ntBASIC0.59□□□□□ -2.31
THRAP10827 MTCYBP4-201ENST00000401524 249 ntBASIC0.59□□□□□ -2.31
THRAP10827 RNU6-373P-201ENST00000411247 98 ntBASIC0.59□□□□□ -2.31
THRAP10827 AL589823.1-201ENST00000429577 183 ntBASIC0.59□□□□□ -2.31
THRAP10827 FABP5P4-201ENST00000437203 171 ntBASIC0.59□□□□□ -2.31
THRAP10827 MTND2P22-201ENST00000444325 1033 ntBASIC0.59□□□□□ -2.31
THRAP10827 AC233266.1-201ENST00000454518 96 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms