Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SNHG28P0DPA3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.3□□□□□ -2.04
SNHG28P0DPA3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.3□□□□□ -2.04
SNHG28P0DPA3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.71-201ENST00000362892 104 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 RNA5SP205-201ENST00000364653 136 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 RNU6-215P-201ENST00000365169 102 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 RNU6-44P-201ENST00000384045 107 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.525-201ENST00000384570 113 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 CYCSP49-201ENST00000420810 319 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AC245047.8-201ENST00000456455 284 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AC005840.1-201ENST00000498412 377 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 RAC1P5-201ENST00000512182 576 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.797-201ENST00000515977 94 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 RNU6-62P-201ENST00000516526 102 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 RNU2-44P-201ENST00000516795 194 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AC115990.1-201ENST00000526957 301 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.3□□□□□ -2.04
SNHG28P0DPA3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AC009127.3-201ENST00000570531 403 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 MIR548X2-201ENST00000579776 100 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 MIR4431-201ENST00000579990 94 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AC005562.2-201ENST00000618264 111 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 AC068205.3-201ENST00000636385 468 ntBASIC2.3□□□□□ -2.04
SNHG28P0DPA3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SNHG28P0DPA3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 RNU6-969P-201ENST00000383900 105 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 RNU6-19P-201ENST00000384718 107 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SNHG28P0DPA3 PTGES3P4-201ENST00000426243 356 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.29□□□□□ -2.04
SNHG28P0DPA3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.29□□□□□ -2.04
SNHG28P0DPA3 RPS20P10-201ENST00000451209 253 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 AL021397.1-201ENST00000451806 248 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 AL137159.1-201ENST00000452808 512 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 RNU7-141P-201ENST00000459304 62 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 RNU6-344P-201ENST00000516635 111 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 RNU1-104P-201ENST00000517280 175 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 AC109810.1-201ENST00000534066 224 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 MIR5006-201ENST00000583027 110 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.29□□□□□ -2.04
SNHG28P0DPA3 SNRPGP20-201ENST00000604477 205 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 AC010889.1-201ENST00000566193 2666 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNHG28P0DPA3 AC131280.1-202ENST00000624067 4211 ntBASIC2.29□□□□□ -2.04
SNHG28P0DPA3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNHG28P0DPA3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNHG28P0DPA3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.28□□□□□ -2.04
SNHG28P0DPA3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 RNU6-899P-201ENST00000363947 107 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 RNA5SP160-201ENST00000364866 120 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.353-201ENST00000365440 108 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 RNU6-417P-201ENST00000384712 107 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 MIR504-201ENST00000385065 83 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 RNA5SP252-201ENST00000391131 119 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 RNU6-383P-201ENST00000410864 94 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 EBAG9P1-201ENST00000418955 543 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 RPL23AP7-203ENST00000449021 469 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AC025033.1-201ENST00000463883 194 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AC092991.1-201ENST00000477176 376 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AC006380.1-201ENST00000603598 186 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 MIR6715A-201ENST00000615929 79 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AC008873.1-201ENST00000625051 138 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 AC010680.1-201ENST00000590024 3590 ntBASIC2.28□□□□□ -2.04
SNHG28P0DPA3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SNHG28P0DPA3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 U8.7-201ENST00000364940 136 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 RNU6-198P-201ENST00000384258 104 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 RNU6-748P-201ENST00000384648 107 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 AC012308.1-201ENST00000451232 178 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 AC112771.1-201ENST00000463581 102 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 RNU6-1333P-201ENST00000516162 93 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 MIR3684-201ENST00000579779 74 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 AC008739.2-201ENST00000597006 317 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 SNRPGP19-201ENST00000603826 189 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 SNORD11B-201ENST00000607707 90 ntBASIC2.27□□□□□ -2.05
SNHG28P0DPA3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.27□□□□□ -2.05
SNHG28P0DPA3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
SNHG28P0DPA3 AL356292.1-201ENST00000283110 373 ntBASIC2.26□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.127-201ENST00000363386 109 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms