Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.15□□□□□ -2.39
SCN2BO60939 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.15□□□□□ -2.39
SCN2BO60939 RNU6-89P-201ENST00000606519 100 ntBASIC0.15□□□□□ -2.39
SCN2BO60939 AL591926.4-201ENST00000616895 298 ntBASIC0.15□□□□□ -2.39
SCN2BO60939 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.15□□□□□ -2.39
SCN2BO60939 AC097520.1-201ENST00000624435 385 ntBASIC0.15□□□□□ -2.39
SCN2BO60939 AC008133.2-201ENST00000624540 351 ntBASIC0.15□□□□□ -2.39
SCN2BO60939 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.15□□□□□ -2.39
SCN2BO60939 MIR1-1-201ENST00000362147 71 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 RNU4-45P-201ENST00000365469 141 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 Y_RNA.405-201ENST00000383979 100 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 Y_RNA.451-201ENST00000384200 100 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 RNU6-281P-201ENST00000384212 103 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 Y_RNA.524-201ENST00000384564 100 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 Y_RNA.561-201ENST00000384694 100 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 RNU6-541P-201ENST00000384709 110 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 MIR520C-201ENST00000385005 87 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 EIF4E2P1-201ENST00000393781 255 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 MIR1827-201ENST00000408549 66 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 RNU4-55P-201ENST00000410731 137 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 SNORD83.1-201ENST00000411362 77 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 AC243428.1-201ENST00000421099 264 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.14□□□□□ -2.39
SCN2BO60939 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.14□□□□□ -2.39
SCN2BO60939 MTCO3P10-201ENST00000455912 772 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 RNU7-66P-201ENST00000459469 62 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.14□□□□□ -2.39
SCN2BO60939 MIR4764-201ENST00000580680 88 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 AC010999.1-201ENST00000611856 324 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 AC073114.1-201ENST00000612027 490 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 AC073544.1-201ENST00000600110 1595 ntBASIC0.14□□□□□ -2.39
SCN2BO60939 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
SCN2BO60939 RNU6-874P-201ENST00000362390 105 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 Y_RNA.473-201ENST00000384333 102 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 SNORA2B-201ENST00000384583 137 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 MIR452-201ENST00000385020 85 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN2BO60939 PCMTD1P1-201ENST00000455560 355 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AC093534.1-201ENST00000504977 132 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN2BO60939 AC046134.1-201ENST00000514454 666 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 SNORA74.3-201ENST00000517108 154 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AL358944.1-201ENST00000528537 144 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 ZNF519P2-201ENST00000557032 169 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 MIR5696-201ENST00000578474 85 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 MIR3672-201ENST00000584290 82 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AP001330.5-201ENST00000607176 411 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AL138726.1-201ENST00000614873 333 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AC007742.2-201ENST00000618226 398 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AL603755.1-201ENST00000619504 163 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AC027279.3-201ENST00000625055 122 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 U6.115-201ENST00000636045 103 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 MIR924-201ENST00000638017 53 ntBASIC0.13□□□□□ -2.39
SCN2BO60939 AC121333.1-201ENST00000567488 2709 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 Y_RNA.373-201ENST00000365600 103 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 MIR329-1-201ENST00000385028 80 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 CALM2P3-201ENST00000400429 449 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 AL354751.2-201ENST00000415471 210 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 DLGAP5P1-201ENST00000430307 464 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 MTATP6P13-201ENST00000438531 667 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 AC083798.1-201ENST00000472671 131 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 CYCTP-201ENST00000504253 315 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.12□□□□□ -2.39
SCN2BO60939 AC074133.1-201ENST00000515696 183 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 AC093023.1-201ENST00000547375 507 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 AC055872.1-201ENST00000570978 278 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN2BO60939 MIR3684-201ENST00000579779 74 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 AC010525.2-201ENST00000590920 195 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 uc_338.6-201ENST00000613544 171 ntBASIC0.12□□□□□ -2.39
SCN2BO60939 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.12□□□□□ -2.39
SCN2BO60939 MIR18A-201ENST00000362310 71 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 Y_RNA.106-201ENST00000363189 100 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 SNORD45.3-201ENST00000363836 72 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 RNA5SP48-201ENST00000363969 126 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 RNU6-280P-201ENST00000364145 104 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 Y_RNA.231-201ENST00000364358 102 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 SNORD113.3-201ENST00000364630 78 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 Y_RNA.296-201ENST00000364930 108 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 MIR573-201ENST00000384964 99 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 AL353997.1-201ENST00000432936 108 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 SNORD123-201ENST00000459473 70 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 RPS3AP17-201ENST00000472594 777 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 Y_RNA.695-201ENST00000516715 107 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 LRRC34P1-201ENST00000542742 915 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 PIGPP4-201ENST00000584447 307 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 MIR3942-201ENST00000585264 109 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 AC073648.5-201ENST00000603502 305 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 AL162730.1-201ENST00000605734 292 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 AC100812.1-201ENST00000607622 580 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 AC104260.1-201ENST00000616660 539 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 AC127459.3-201ENST00000624328 466 ntBASIC0.11□□□□□ -2.39
SCN2BO60939 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
SCN2BO60939 RNY1P16-201ENST00000363063 111 ntBASIC0.1□□□□□ -2.39
SCN2BO60939 SNORD44.1-201ENST00000363202 61 ntBASIC0.1□□□□□ -2.39
SCN2BO60939 Y_RNA.148-201ENST00000363557 117 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 258.3 ms