Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC027419.1-201ENST00000522976 328 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.476-201ENST00000384347 108 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR562-201ENST00000384894 95 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR27B-201ENST00000385129 97 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 RNA5SP323-201ENST00000391094 133 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-855P-201ENST00000410395 104 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 AC069257.2-201ENST00000441819 155 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-1023P-201ENST00000516137 106 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU7-172P-201ENST00000517125 64 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 U4.3-201ENST00000621047 82 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU1-22P-201ENST00000363334 158 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORA20.1-201ENST00000364790 130 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 MTND2P29-201ENST00000438595 412 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU7-94P-201ENST00000459576 63 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 AC097462.1-201ENST00000514125 324 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-1271P-201ENST00000517049 105 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORA31.25-201ENST00000517242 134 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR3145-201ENST00000580727 82 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 AL078604.3-201ENST00000615580 211 ntBASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHGA3Q9Y5H0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.20-201ENST00000362479 113 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-862P-201ENST00000362804 105 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.307-201ENST00000365022 117 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.447-201ENST00000384184 113 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 SNORA80E-201ENST00000384744 137 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 AL117342.1-201ENST00000404861 406 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 MIR1283-2-201ENST00000408621 87 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 RN7SKP192-201ENST00000411291 327 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 AP005660.1-201ENST00000522972 293 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 AC110588.1-201ENST00000559699 137 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 AC069114.2-201ENST00000604699 304 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHGA3Q9Y5H0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 EBAG9P1-201ENST00000418955 543 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 U8.19-201ENST00000459095 133 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 AC010409.1-201ENST00000487382 476 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU7-193P-201ENST00000516723 65 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU7-116P-201ENST00000516940 62 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 MIR4635-201ENST00000583759 79 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 AL162424.1-201ENST00000602325 221 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
PCDHGA3Q9Y5H0 ZNF658B-202ENST00000615961 3375 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-376P-201ENST00000384731 106 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 AL603910.2-201ENST00000407268 136 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 RNA5SP320-201ENST00000516263 124 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 AC005972.2-201ENST00000604690 348 ntBASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.54-201ENST00000362766 105 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU4-13P-201ENST00000364019 141 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 MIR518C-201ENST00000384822 101 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 MIR520G-201ENST00000385064 90 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 SNORD23.1-201ENST00000408212 104 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-847P-201ENST00000411115 108 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 UBL5P3-201ENST00000475112 231 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 IGLV3-17-201ENST00000519099 244 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 MIR3128-201ENST00000581957 66 ntBASIC2.43□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.82-201ENST00000363000 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.92-201ENST00000363043 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.217-201ENST00000364214 105 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.235-201ENST00000364412 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.306-201ENST00000365015 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.312-201ENST00000365089 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 Y_RNA.322-201ENST00000365151 102 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 RNU6-117P-201ENST00000365415 107 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 SNORA8-201ENST00000384574 139 ntBASIC2.42□□□□□ -2.02
PCDHGA3Q9Y5H0 MIR597-201ENST00000384968 97 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms