Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.19-201ENST00000362462 99 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-454P-201ENST00000364292 107 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.276-201ENST00000364732 109 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 U8.13-201ENST00000390842 128 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 AL390729.2-201ENST00000416137 156 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 LINC01399-202ENST00000458450 244 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 AC006380.1-201ENST00000603598 186 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 PRR13P7-201ENST00000605538 430 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTCAP3Q53RY4 MIRLET7G-201ENST00000362280 84 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.47-201ENST00000362697 108 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.574-201ENST00000384766 95 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 SNORD115-46-201ENST00000390982 71 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 HMGN2P34-201ENST00000437647 269 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 SNORD65B-201ENST00000459126 73 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 SNORA40.15-201ENST00000516884 107 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 MIR4423-201ENST00000580922 80 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 U6.115-201ENST00000636045 103 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 MIR338-201ENST00000636369 67 ntBASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.176-201ENST00000363815 109 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 SNORD63-201ENST00000384262 68 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 MIR583-201ENST00000384846 75 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 RNU2-54P-201ENST00000410299 190 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 AL731563.1-201ENST00000442202 214 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 AC010598.1-201ENST00000510378 103 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-966P-201ENST00000516479 104 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 MIR4300-201ENST00000581016 96 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 AC006435.5-201ENST00000624486 112 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 AC022513.1-201ENST00000624512 117 ntBASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-417P-201ENST00000384712 107 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 MIR215-201ENST00000384858 110 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AL117342.1-201ENST00000404861 406 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 RPL21P38-201ENST00000418090 167 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 MTCYBP9-201ENST00000431021 303 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 RPL23AP7-203ENST00000449021 469 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 SUMO1P2-201ENST00000452524 304 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AC025465.3-201ENST00000510570 311 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 MTCO2P24-201ENST00000515611 426 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-155P-201ENST00000516347 100 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 RNU2-12P-201ENST00000517216 168 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AC010900.2-201ENST00000604508 210 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AC022441.3-201ENST00000605737 136 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 AC011373.1-201ENST00000607270 237 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 MIR376A1-201ENST00000616574 68 ntBASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTCAP3Q53RY4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 snoU2_19.2-201ENST00000363024 80 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 RNU1-96P-201ENST00000364163 162 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 Y_RNA.446-201ENST00000384178 104 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 SNORA20B-201ENST00000384220 132 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 RNU6-574P-201ENST00000384265 107 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 CST2P1-201ENST00000425770 87 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AC099677.2-201ENST00000436385 175 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AC005042.3-201ENST00000453230 174 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 RNVU1-2-201ENST00000516326 135 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 RNU1-40P-201ENST00000516816 164 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 RNU1-97P-201ENST00000516872 164 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 RNU7-110P-201ENST00000516891 62 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AC027419.1-201ENST00000522976 328 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AP003733.2-201ENST00000529409 171 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms