Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 Y_RNA.683-201ENST00000516508 93 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 SCARNA16.2-201ENST00000516520 172 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 RNU6-113P-201ENST00000516653 101 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 RNU6-1213P-201ENST00000517075 94 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 RNU7-128P-201ENST00000517247 62 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AC024995.1-201ENST00000523014 93 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AL442163.3-201ENST00000554110 156 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.78□□□□□ -2.28
TNFRSF9Q07011 FAM106DP-201ENST00000586416 501 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AC125232.2-201ENST00000592457 143 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AL929325.1-201ENST00000603096 117 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AC022217.4-201ENST00000604389 163 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AL359075.3-201ENST00000613288 217 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AL357075.2-201ENST00000614906 189 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
TNFRSF9Q07011 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TNFRSF9Q07011 RNA5SP361-201ENST00000362686 118 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 RNU1-36P-201ENST00000365130 165 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 SNORD81.2-201ENST00000365153 76 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.358-201ENST00000365491 99 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.364-201ENST00000365532 101 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 RNU6-1304P-201ENST00000411374 106 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 ELOCP21-201ENST00000412558 336 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.77□□□□□ -2.29
TNFRSF9Q07011 MTCYBP10-201ENST00000424905 650 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.77□□□□□ -2.29
TNFRSF9Q07011 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AC116353.2-201ENST00000505332 712 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AC022868.1-201ENST00000517767 391 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AC023157.2-201ENST00000540596 141 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 MIR4709-201ENST00000577272 72 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AC015688.6-201ENST00000577737 104 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AC211469.2-201ENST00000605461 205 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 AL021879.1-201ENST00000611756 288 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 MIR1244-1-201ENST00000612829 85 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 RMST_2.1-201ENST00000617263 136 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 U6.73-201ENST00000619194 103 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 MIR1244-3-201ENST00000635744 85 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 MIR1244-2-201ENST00000636449 85 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 MIR1244-4-202ENST00000636813 85 ntBASIC0.77□□□□□ -2.29
TNFRSF9Q07011 RNU6-879P-201ENST00000364328 108 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 RNU6-99P-201ENST00000364721 107 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 MRPL35P1-201ENST00000404272 572 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AL355796.1-201ENST00000406706 323 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AC092423.1-201ENST00000430165 186 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 RPL23AP50-201ENST00000434149 455 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 RNU7-99P-201ENST00000516271 62 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.691-201ENST00000516611 103 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AL137100.2-201ENST00000555786 315 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.76□□□□□ -2.29
TNFRSF9Q07011 PISRT1.1-201ENST00000616930 107 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AC022306.2-201ENST00000617563 647 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 MIR8054-201ENST00000620877 86 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AC092794.2-201ENST00000620933 563 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 AL669831.3-213ENST00000636676 183 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 TPTEP1-208ENST00000636884 213 ntBASIC0.76□□□□□ -2.29
TNFRSF9Q07011 RNU6-1266P-201ENST00000362794 105 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.390-201ENST00000383932 102 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 SNORA20B-201ENST00000384220 132 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 RNU6-318P-201ENST00000384283 103 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 RNU6-1031P-201ENST00000384773 107 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.646-201ENST00000410980 101 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.75□□□□□ -2.29
TNFRSF9Q07011 RPS4XP11-201ENST00000446897 772 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 HSPE1P13-201ENST00000451143 297 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 PCNPP5-201ENST00000452246 481 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 RNU7-34P-201ENST00000459394 64 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 RPS26P45-201ENST00000471748 340 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 RPL17P19-201ENST00000489069 552 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AC010469.2-201ENST00000496412 480 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AC082651.2-201ENST00000496833 166 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AC010598.1-201ENST00000510378 103 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AP002001.1-203ENST00000534002 267 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 APOOP3-201ENST00000536787 586 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AC005899.2-201ENST00000584353 90 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 MIR4438-201ENST00000585271 93 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AC022432.1-201ENST00000595739 310 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 BX284668.6-201ENST00000606899 438 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 AC021506.2-201ENST00000612354 169 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
TNFRSF9Q07011 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.166-201ENST00000363730 102 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 SNORA25-201ENST00000384384 134 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 Y_RNA.498-201ENST00000384460 102 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 SNORA12.1-201ENST00000390873 148 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 RNU6-440P-201ENST00000390882 105 ntBASIC0.74□□□□□ -2.29
TNFRSF9Q07011 RNU6-370P-201ENST00000411008 104 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms