Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC016909.1-201ENST00000415916 166 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 CYP2C59P-201ENST00000457790 269 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU6-437P-201ENST00000459408 95 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU6-991P-201ENST00000516168 107 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 RNU7-116P-201ENST00000516940 62 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 PRELID2P1-201ENST00000552837 301 ntBASIC2.88□□□□□ -1.95
SLC6A11P48066 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC6A11P48066 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SLC6A11P48066 RNU4-41P-201ENST00000364426 143 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 SNORA68.1-201ENST00000364537 132 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 RNU6-257P-201ENST00000410238 98 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 RNA5SP511-201ENST00000410487 115 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 Y_RNA.622-201ENST00000411091 108 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 AL513477.1-202ENST00000417061 214 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 RPL30P13-201ENST00000418873 348 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 AC009969.1-201ENST00000438726 172 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 AC010531.2-201ENST00000465012 153 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 RNU6-62P-201ENST00000516526 102 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC6A11P48066 AL031274.2-201ENST00000599419 203 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 MIR6715A-201ENST00000615929 79 ntBASIC2.87□□□□□ -1.95
SLC6A11P48066 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SLC6A11P48066 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SLC6A11P48066 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 AC010332.2-201ENST00000613083 1904 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC6A11P48066 AC009487.4-201ENST00000624969 3585 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 RNU6-22P-201ENST00000384355 107 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 MIR196B-201ENST00000384852 84 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 RNU2-51P-201ENST00000410708 197 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 AC010154.1-201ENST00000425857 269 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 RPL36AP21-201ENST00000490372 323 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 RNU2-34P-201ENST00000516534 121 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 AC015720.1-201ENST00000565251 277 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 AC090115.4-201ENST00000609970 188 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 AC006435.5-201ENST00000624486 112 ntBASIC2.86□□□□□ -1.95
SLC6A11P48066 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC6A11P48066 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC6A11P48066 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SLC6A11P48066 FAM35CP-201ENST00000554755 2470 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SLC6A11P48066 RNU4-82P-201ENST00000362443 140 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 Y_RNA.521-201ENST00000384560 114 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 SNORA40-201ENST00000388090 126 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 MIR1253-201ENST00000408273 105 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 RNU2-63P-201ENST00000410792 194 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 MTATP6P29-201ENST00000415057 132 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC6A11P48066 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.85□□□□□ -1.95
SLC6A11P48066 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC6A11P48066 RN7SKP282-201ENST00000516824 299 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC6A11P48066 MIR4438-201ENST00000585271 93 ntBASIC2.85□□□□□ -1.95
SLC6A11P48066 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SLC6A11P48066 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
SLC6A11P48066 AC008264.2-201ENST00000610193 3731 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SLC6A11P48066 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC6A11P48066 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.84□□□□□ -1.95
SLC6A11P48066 RNU6-1154P-201ENST00000391001 104 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 Y_RNA.587-201ENST00000391210 103 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC6A11P48066 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.84□□□□□ -1.95
SLC6A11P48066 SNORA4.4-201ENST00000515921 135 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 RNU6-313P-201ENST00000516317 112 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 AC112693.2-201ENST00000556538 232 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 AL355297.2-201ENST00000604792 129 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 AC004832.5-201ENST00000608677 401 ntBASIC2.84□□□□□ -1.95
SLC6A11P48066 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SLC6A11P48066 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.84□□□□□ -1.95
SLC6A11P48066 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
SLC6A11P48066 CENPCP1-201ENST00000533085 2578 ntBASIC2.84□□□□□ -1.96
SLC6A11P48066 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SLC6A11P48066 ZNF702P-202ENST00000434269 1966 ntBASIC2.83□□□□□ -1.96
SLC6A11P48066 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC6A11P48066 AC138915.1-201ENST00000565427 1685 ntBASIC2.83□□□□□ -1.96
SLC6A11P48066 MIR1278-201ENST00000408753 81 ntBASIC2.83□□□□□ -1.96
SLC6A11P48066 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
SLC6A11P48066 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC6A11P48066 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
SLC6A11P48066 RNU7-172P-201ENST00000517125 64 ntBASIC2.83□□□□□ -1.96
SLC6A11P48066 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC6A11P48066 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC6A11P48066 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.83□□□□□ -1.96
SLC6A11P48066 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
SLC6A11P48066 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A11P48066 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A11P48066 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC6A11P48066 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.83□□□□□ -1.96
SLC6A11P48066 SNORD45.3-201ENST00000363836 72 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 RNU6-117P-201ENST00000365415 107 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 DYNLT3P1-201ENST00000378574 347 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 MIR512-1-201ENST00000384913 84 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 MIR95-201ENST00000385072 81 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 AL512604.1-201ENST00000404812 257 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 SNORA79-201ENST00000408376 140 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 HMGN2P34-201ENST00000437647 269 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 AL357134.1-201ENST00000445848 426 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 351.2 ms