Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 MIR126-201ENST00000362291 85 ntBASIC1.69□□□□□ -2.14
TO15178 Y_RNA.101-201ENST00000363154 102 ntBASIC1.69□□□□□ -2.14
TO15178 RNU6-407P-201ENST00000365280 104 ntBASIC1.69□□□□□ -2.14
TO15178 RNU6-1227P-201ENST00000383981 107 ntBASIC1.69□□□□□ -2.14
TO15178 MIR583-201ENST00000384846 75 ntBASIC1.69□□□□□ -2.14
TO15178 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
TO15178 RNU6-823P-201ENST00000391042 103 ntBASIC1.69□□□□□ -2.14
TO15178 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
TO15178 RPEP5-201ENST00000441137 268 ntBASIC1.69□□□□□ -2.14
TO15178 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.69□□□□□ -2.14
TO15178 RPL36AP21-201ENST00000490372 323 ntBASIC1.69□□□□□ -2.14
TO15178 SNORA70.12-201ENST00000516084 153 ntBASIC1.69□□□□□ -2.14
TO15178 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
TO15178 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.69□□□□□ -2.14
TO15178 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.69□□□□□ -2.14
TO15178 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
TO15178 AC104984.5-201ENST00000586878 94 ntBASIC1.69□□□□□ -2.14
TO15178 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.69□□□□□ -2.14
TO15178 U6.108-201ENST00000637764 58 ntBASIC1.69□□□□□ -2.14
TO15178 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TO15178 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
TO15178 Y_RNA.158-201ENST00000363651 101 ntBASIC1.68□□□□□ -2.14
TO15178 SNORD115-30-201ENST00000364117 82 ntBASIC1.68□□□□□ -2.14
TO15178 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
TO15178 Y_RNA.389-201ENST00000383924 113 ntBASIC1.68□□□□□ -2.14
TO15178 Y_RNA.446-201ENST00000384178 104 ntBASIC1.68□□□□□ -2.14
TO15178 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
TO15178 Y_RNA.645-201ENST00000391229 102 ntBASIC1.68□□□□□ -2.14
TO15178 AC005002.2-201ENST00000438228 269 ntBASIC1.68□□□□□ -2.14
TO15178 MTCYBP6-201ENST00000441810 138 ntBASIC1.68□□□□□ -2.14
TO15178 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
TO15178 RNU7-94P-201ENST00000459576 63 ntBASIC1.68□□□□□ -2.14
TO15178 RPS26P45-201ENST00000471748 340 ntBASIC1.68□□□□□ -2.14
TO15178 RPL23AP63-201ENST00000498752 471 ntBASIC1.68□□□□□ -2.14
TO15178 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.68□□□□□ -2.14
TO15178 RPL21P9-201ENST00000556149 474 ntBASIC1.68□□□□□ -2.14
TO15178 AC022441.3-201ENST00000605737 136 ntBASIC1.68□□□□□ -2.14
TO15178 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.68□□□□□ -2.14
TO15178 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TO15178 RNU6-661P-201ENST00000362409 107 ntBASIC1.67□□□□□ -2.14
TO15178 RNU1-22P-201ENST00000363334 158 ntBASIC1.67□□□□□ -2.14
TO15178 RNU6-1175P-201ENST00000365200 107 ntBASIC1.67□□□□□ -2.14
TO15178 Y_RNA.570-201ENST00000384750 101 ntBASIC1.67□□□□□ -2.14
TO15178 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
TO15178 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TO15178 RNU6-360P-201ENST00000390944 104 ntBASIC1.67□□□□□ -2.14
TO15178 RPL23AP36-201ENST00000413895 458 ntBASIC1.67□□□□□ -2.14
TO15178 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.67□□□□□ -2.14
TO15178 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.67□□□□□ -2.14
TO15178 FTH1P12-201ENST00000432137 551 ntBASIC1.67□□□□□ -2.14
TO15178 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
TO15178 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
TO15178 AC073910.1-201ENST00000445047 438 ntBASIC1.67□□□□□ -2.14
TO15178 HMGN2P23-201ENST00000456759 269 ntBASIC1.67□□□□□ -2.14
TO15178 AC097462.1-201ENST00000514125 324 ntBASIC1.67□□□□□ -2.14
TO15178 RNU6-155P-201ENST00000516347 100 ntBASIC1.67□□□□□ -2.14
TO15178 Y_RNA.715-201ENST00000517082 110 ntBASIC1.67□□□□□ -2.14
TO15178 RNU7-172P-201ENST00000517125 64 ntBASIC1.67□□□□□ -2.14
TO15178 RNU7-128P-201ENST00000517247 62 ntBASIC1.67□□□□□ -2.14
TO15178 RNA5SP437-201ENST00000517249 129 ntBASIC1.67□□□□□ -2.14
TO15178 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.67□□□□□ -2.14
TO15178 MIR4423-201ENST00000580922 80 ntBASIC1.67□□□□□ -2.14
TO15178 AC104695.3-201ENST00000604052 296 ntBASIC1.67□□□□□ -2.14
TO15178 AC040896.1-201ENST00000613819 479 ntBASIC1.67□□□□□ -2.14
TO15178 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
TO15178 RNU6-324P-201ENST00000363957 106 ntBASIC1.66□□□□□ -2.14
TO15178 Y_RNA.216-201ENST00000364205 93 ntBASIC1.66□□□□□ -2.14
TO15178 Y_RNA.361-201ENST00000365515 120 ntBASIC1.66□□□□□ -2.14
TO15178 Y_RNA.380-201ENST00000365663 111 ntBASIC1.66□□□□□ -2.14
TO15178 SNORD63-201ENST00000384262 68 ntBASIC1.66□□□□□ -2.14
TO15178 SNORA26.9-201ENST00000391322 122 ntBASIC1.66□□□□□ -2.14
TO15178 AL031003.1-201ENST00000404229 172 ntBASIC1.66□□□□□ -2.14
TO15178 MIR1252-201ENST00000408861 65 ntBASIC1.66□□□□□ -2.14
TO15178 RNU6-1199P-201ENST00000411249 104 ntBASIC1.66□□□□□ -2.14
TO15178 AC005042.3-201ENST00000453230 174 ntBASIC1.66□□□□□ -2.14
TO15178 RPS26P55-201ENST00000471178 356 ntBASIC1.66□□□□□ -2.14
TO15178 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
TO15178 RNU6-1278P-201ENST00000516130 107 ntBASIC1.66□□□□□ -2.14
TO15178 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
TO15178 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.66□□□□□ -2.14
TO15178 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
TO15178 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.66□□□□□ -2.14
TO15178 MIR6715A-201ENST00000615929 79 ntBASIC1.66□□□□□ -2.14
TO15178 AC127459.3-201ENST00000624328 466 ntBASIC1.66□□□□□ -2.14
TO15178 MIR424-201ENST00000362227 98 ntBASIC1.65□□□□□ -2.15
TO15178 Y_RNA.143-201ENST00000363520 106 ntBASIC1.65□□□□□ -2.15
TO15178 RNU6-950P-201ENST00000384651 107 ntBASIC1.65□□□□□ -2.15
TO15178 SNORA40.18-201ENST00000391200 128 ntBASIC1.65□□□□□ -2.15
TO15178 AC003989.2-201ENST00000440224 169 ntBASIC1.65□□□□□ -2.15
TO15178 RNU6-1153P-201ENST00000516760 105 ntBASIC1.65□□□□□ -2.15
TO15178 RNU7-110P-201ENST00000516891 62 ntBASIC1.65□□□□□ -2.15
TO15178 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
TO15178 DEFB122-202ENST00000569013 197 ntBASIC1.65□□□□□ -2.15
TO15178 MIR4255-201ENST00000579351 72 ntBASIC1.65□□□□□ -2.15
TO15178 AC073413.2-201ENST00000604332 360 ntBASIC1.65□□□□□ -2.15
TO15178 AC011373.1-201ENST00000607270 237 ntBASIC1.65□□□□□ -2.15
TO15178 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.65□□□□□ -2.15
TO15178 AL021879.1-201ENST00000611756 288 ntBASIC1.65□□□□□ -2.15
TO15178 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
TO15178 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms