Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU6-1023P-201ENST00000516137 106 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 AC005357.1-201ENST00000588399 301 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
DDX43Q9NXZ2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AL356292.1-201ENST00000283110 373 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 SNORD81.1-201ENST00000363064 77 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.237-201ENST00000364439 102 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 MT-TR-201ENST00000387439 65 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 SNORA12-201ENST00000391162 147 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 SNORD58.1-201ENST00000391313 66 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 BX510359.4-201ENST00000423750 193 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AC007395.1-201ENST00000451333 677 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 MTND4LP30-201ENST00000454092 297 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AC091179.3-201ENST00000474761 144 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 SNORA40.9-201ENST00000515895 93 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 RNU6-991P-201ENST00000516168 107 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 RNU6-1338P-201ENST00000516328 91 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AK6P2-201ENST00000549020 471 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AC055872.1-201ENST00000570978 278 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 MIR3923-201ENST00000579521 83 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AL109918.3-201ENST00000603072 338 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 MZT1P2-201ENST00000604387 248 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AC010900.2-201ENST00000604508 210 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 AC078938.1-201ENST00000620993 318 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 ZNF204P-201ENST00000416749 2397 ntBASIC2.08□□□□□ -2.08
DDX43Q9NXZ2 SNORD113-8-201ENST00000363497 74 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RNU6-280P-201ENST00000364145 104 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.257-201ENST00000364596 102 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.286-201ENST00000364813 102 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RNU6-245P-201ENST00000384020 107 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.489-201ENST00000384410 101 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.570-201ENST00000384750 101 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 MIR208B-201ENST00000401172 77 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 AL357139.1-201ENST00000407792 426 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RNU6-847P-201ENST00000411115 108 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 ELOCP21-201ENST00000412558 336 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RPL39P38-201ENST00000467018 153 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RNU6-966P-201ENST00000516479 104 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 MIR3668-201ENST00000582138 75 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 AC010999.1-201ENST00000611856 324 ntBASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
DDX43Q9NXZ2 RNU1-58P-201ENST00000362413 163 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.20-201ENST00000362479 113 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.477-201ENST00000384352 108 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 MIR764-201ENST00000390811 85 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 U8.13-201ENST00000390842 128 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 RNU11-3P-201ENST00000391111 133 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.673-201ENST00000516306 88 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 SNORA25.14-201ENST00000516481 132 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 DEFB108E-201ENST00000524692 240 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 AP002001.1-203ENST00000534002 267 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 RRN3P3-201ENST00000549207 578 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 EIF4A1P12-201ENST00000551910 141 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 AC025754.2-201ENST00000606491 432 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 U6.104-201ENST00000637979 90 ntBASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.06□□□□□ -2.08
DDX43Q9NXZ2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 MTND5P35-201ENST00000557537 1720 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 RNU6-626P-201ENST00000363354 107 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.416-201ENST00000384014 113 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 RNU6-20P-201ENST00000384106 107 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.602-201ENST00000410535 92 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 RNA5SP504-201ENST00000410676 117 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 RNU2-14P-201ENST00000411053 191 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 AL445685.2-201ENST00000422551 342 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 RN7SL274P-201ENST00000492268 272 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 MIR449C-201ENST00000516047 92 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.683-201ENST00000516508 93 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
DDX43Q9NXZ2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 AL391987.6-201ENST00000305671 199 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms