Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PRELID2P1-201ENST00000552837 301 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 MIR4662B-201ENST00000579498 81 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.55□□□□□ -1.84
IFT43Q96FT9 MIR8058-201ENST00000615737 89 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
IFT43Q96FT9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
IFT43Q96FT9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
IFT43Q96FT9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
IFT43Q96FT9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.55□□□□□ -1.84
IFT43Q96FT9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
IFT43Q96FT9 AL356274.2-201ENST00000624379 3752 ntBASIC3.55□□□□□ -1.84
IFT43Q96FT9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
IFT43Q96FT9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
IFT43Q96FT9 Y_RNA.91-201ENST00000363042 107 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 MIR491-201ENST00000384877 84 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 RNU1-101P-201ENST00000391171 127 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 RN7SKP111-201ENST00000410349 271 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 Y_RNA.617-201ENST00000410920 90 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 AC006028.1-201ENST00000438379 402 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.54□□□□□ -1.84
IFT43Q96FT9 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 SNORA4.4-201ENST00000515921 135 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 AC026333.2-201ENST00000542164 106 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 AC011604.1-201ENST00000545978 196 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 AC107294.3-201ENST00000609211 526 ntBASIC3.54□□□□□ -1.84
IFT43Q96FT9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
IFT43Q96FT9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
IFT43Q96FT9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
IFT43Q96FT9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
IFT43Q96FT9 Y_RNA.111-201ENST00000363248 100 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 RNU6-1209P-201ENST00000363655 107 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 RNU6-525P-201ENST00000363685 104 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 RNU6-743P-201ENST00000364151 106 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 Y_RNA.796-201ENST00000364268 102 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 Y_RNA.799-201ENST00000364992 102 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 AC123900.1-201ENST00000420390 96 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.53□□□□□ -1.84
IFT43Q96FT9 AL161788.1-201ENST00000441805 169 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 AL357552.1-201ENST00000445254 415 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 CYP2C59P-201ENST00000457790 269 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 SNORD11-201ENST00000459124 84 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 RN7SL807P-201ENST00000470923 297 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 RPS26P45-201ENST00000471748 340 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.53□□□□□ -1.84
IFT43Q96FT9 SEM1P1-201ENST00000506694 209 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 SNORA70.19-201ENST00000516717 90 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.53□□□□□ -1.84
IFT43Q96FT9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.53□□□□□ -1.84
IFT43Q96FT9 AC091178.2-201ENST00000584401 117 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 AC004832.5-201ENST00000608677 401 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 AL121890.5-201ENST00000620848 304 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 AC022149.2-201ENST00000621061 203 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.53□□□□□ -1.84
IFT43Q96FT9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
IFT43Q96FT9 MFSD8-233ENST00000641482 4860 ntBASIC3.53□□□□□ -1.84
IFT43Q96FT9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.53□□□□□ -1.84
IFT43Q96FT9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
IFT43Q96FT9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
IFT43Q96FT9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
IFT43Q96FT9 RNU6-1138P-201ENST00000365359 106 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 Y_RNA.346-201ENST00000365385 112 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 MIR591-201ENST00000385290 95 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 FO393413.1-201ENST00000402892 195 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 MIR1253-201ENST00000408273 105 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.52□□□□□ -1.85
IFT43Q96FT9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.52□□□□□ -1.85
IFT43Q96FT9 CKS1BP2-201ENST00000497342 240 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 AC093259.1-201ENST00000509755 300 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 SNORA74D-201ENST00000516404 141 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 SNORA18.4-201ENST00000516440 124 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 RNU2-60P-201ENST00000517290 128 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 Pinc.1-201ENST00000616452 154 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.52□□□□□ -1.85
IFT43Q96FT9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.52□□□□□ -1.85
IFT43Q96FT9 AL355596.1-201ENST00000565399 3996 ntBASIC3.52□□□□□ -1.85
IFT43Q96FT9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
IFT43Q96FT9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
IFT43Q96FT9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
IFT43Q96FT9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
IFT43Q96FT9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
IFT43Q96FT9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
IFT43Q96FT9 RNU6-309P-201ENST00000364573 106 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 MIR490-201ENST00000384865 128 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 MIR95-201ENST00000385072 81 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 MIR624-201ENST00000385217 97 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 AP001486.1-201ENST00000463339 476 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 RPL23AP67-201ENST00000465341 474 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 OR9P1P-201ENST00000496431 281 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 SNORA72.7-201ENST00000516349 94 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.51□□□□□ -1.85
IFT43Q96FT9 U2.20-201ENST00000613956 192 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 U6.73-201ENST00000619194 103 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 SNORA50A-202ENST00000629536 136 ntBASIC3.51□□□□□ -1.85
IFT43Q96FT9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
IFT43Q96FT9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.51□□□□□ -1.85
IFT43Q96FT9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
IFT43Q96FT9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
IFT43Q96FT9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
IFT43Q96FT9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms