Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MIR873-201ENST00000401120 77 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 RNU2-38P-201ENST00000410856 79 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 Z98742.3-201ENST00000418637 326 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DOBP13765 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DOBP13765 MRPS10P1-201ENST00000448483 130 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 RPL39P38-201ENST00000467018 153 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 RNU6-1146P-201ENST00000516282 102 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 SUMO2P18-201ENST00000518873 252 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DOBP13765 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DOBP13765 MIR6895-201ENST00000613497 78 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 MIR6873-201ENST00000622788 63 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
HLA-DOBP13765 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DOBP13765 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DOBP13765 SNORA25.1-201ENST00000362326 128 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 SNORD114-6-201ENST00000364393 72 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 RNU6-1164P-201ENST00000364428 107 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 Y_RNA.329-201ENST00000365209 107 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 Y_RNA.418-201ENST00000384029 102 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 SNORA20B-201ENST00000384220 132 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 AL023284.1-201ENST00000403956 276 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 AL355796.1-201ENST00000406706 323 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 MIR548H3-201ENST00000408771 118 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 RNU6-710P-201ENST00000410424 105 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
HLA-DOBP13765 SNORA59A-201ENST00000459326 152 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.89□□□□□ -2.11
HLA-DOBP13765 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DOBP13765 RNA5SP82-201ENST00000516707 92 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.89□□□□□ -2.11
HLA-DOBP13765 DEFB117-201ENST00000602356 141 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 AC006006.1-201ENST00000603082 144 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 AC022202.1-201ENST00000613515 211 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
HLA-DOBP13765 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DOBP13765 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DOBP13765 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DOBP13765 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DOBP13765 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DOBP13765 SNORA27.1-201ENST00000362604 124 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 Y_RNA.188-201ENST00000363952 111 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 RNA5SP493-201ENST00000364115 91 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 RNU1-52P-201ENST00000384190 164 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 RNU2-61P-201ENST00000411069 191 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 AC060773.1-201ENST00000421698 310 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 MTCO1P5-201ENST00000433573 344 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 AL121890.1-201ENST00000435457 205 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 RPL23AP7-203ENST00000449021 469 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 AC011406.1-201ENST00000512440 370 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 SCARNA24.2-201ENST00000516968 130 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DOBP13765 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DOBP13765 AC012433.1-201ENST00000588916 398 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 AL353149.1-201ENST00000610667 244 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DOBP13765 U2.14-201ENST00000615943 113 ntBASIC1.88□□□□□ -2.11
HLA-DOBP13765 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DOBP13765 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DOBP13765 CENPCP1-201ENST00000533085 2578 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 RNU1-58P-201ENST00000362413 163 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 snoU2-30.2-201ENST00000362805 70 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 SNORD115-3-201ENST00000363100 82 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 Y_RNA.307-201ENST00000365022 117 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 Y_RNA.352-201ENST00000365439 102 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 Y_RNA.478-201ENST00000384358 107 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 SNORA64-201ENST00000384674 134 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 MIR23A-201ENST00000385245 73 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 AC010154.1-201ENST00000425857 269 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 ATP5J2P3-201ENST00000451550 258 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DOBP13765 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DOBP13765 MIR3169-201ENST00000578032 83 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 SNORD14A-201ENST00000606526 91 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 AL590808.1-201ENST00000618696 141 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 AC064859.1-201ENST00000624741 174 ntBASIC1.87□□□□□ -2.11
HLA-DOBP13765 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DOBP13765 RNU4-80P-201ENST00000363200 141 ntBASIC1.86□□□□□ -2.11
HLA-DOBP13765 RNA5SP160-201ENST00000364866 120 ntBASIC1.86□□□□□ -2.11
HLA-DOBP13765 Y_RNA.447-201ENST00000384184 113 ntBASIC1.86□□□□□ -2.11
HLA-DOBP13765 RNA5SP508-201ENST00000411327 119 ntBASIC1.86□□□□□ -2.11
HLA-DOBP13765 RNA5SP270-201ENST00000411361 118 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 218.4 ms