Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 U6.115-201ENST00000636045 103 ntBASIC3.58□□□□□ -1.84
NEFMP07197 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.58□□□□□ -1.84
NEFMP07197 RNU6-199P-201ENST00000362954 107 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNU6-1205P-201ENST00000363625 106 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNU4-10P-201ENST00000364383 140 ntBASIC3.57□□□□□ -1.84
NEFMP07197 MIR539-201ENST00000365690 78 ntBASIC3.57□□□□□ -1.84
NEFMP07197 SNORA67.2-201ENST00000384300 149 ntBASIC3.57□□□□□ -1.84
NEFMP07197 Y_RNA.500-201ENST00000384466 111 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNU1-57P-201ENST00000384491 166 ntBASIC3.57□□□□□ -1.84
NEFMP07197 RNA5SP272-201ENST00000516095 111 ntBASIC3.57□□□□□ -1.84
NEFMP07197 AC004486.1-201ENST00000546846 233 ntBASIC3.57□□□□□ -1.84
NEFMP07197 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.57□□□□□ -1.84
NEFMP07197 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
NEFMP07197 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NEFMP07197 Y_RNA.24-201ENST00000362508 103 ntBASIC3.56□□□□□ -1.84
NEFMP07197 RNU6-1048P-201ENST00000364054 107 ntBASIC3.56□□□□□ -1.84
NEFMP07197 Y_RNA.310-201ENST00000365063 113 ntBASIC3.56□□□□□ -1.84
NEFMP07197 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.56□□□□□ -1.84
NEFMP07197 MTND4LP9-201ENST00000427694 174 ntBASIC3.56□□□□□ -1.84
NEFMP07197 AC092427.1-202ENST00000430569 476 ntBASIC3.56□□□□□ -1.84
NEFMP07197 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.56□□□□□ -1.84
NEFMP07197 RNU6-1007P-201ENST00000516586 107 ntBASIC3.56□□□□□ -1.84
NEFMP07197 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEFMP07197 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.56□□□□□ -1.84
NEFMP07197 AC068700.1-201ENST00000565862 3754 ntBASIC3.55□□□□□ -1.84
NEFMP07197 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEFMP07197 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NEFMP07197 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NEFMP07197 AC062016.1-201ENST00000355719 319 ntBASIC3.55□□□□□ -1.84
NEFMP07197 Y_RNA.127-201ENST00000363386 109 ntBASIC3.55□□□□□ -1.84
NEFMP07197 RNU6-969P-201ENST00000383900 105 ntBASIC3.55□□□□□ -1.84
NEFMP07197 RNU6-144P-201ENST00000383951 107 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AL139095.1-201ENST00000404326 391 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.55□□□□□ -1.84
NEFMP07197 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AC103810.1-201ENST00000579873 453 ntBASIC3.55□□□□□ -1.84
NEFMP07197 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.55□□□□□ -1.84
NEFMP07197 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NEFMP07197 RNU2-52P-201ENST00000410680 190 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AC009414.1-201ENST00000427200 443 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
NEFMP07197 RNU7-141P-201ENST00000459304 62 ntBASIC3.54□□□□□ -1.84
NEFMP07197 HSPE1P18-201ENST00000517602 280 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-2-201ENST00000582974 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-1-201ENST00000584160 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-3-201ENST00000584855 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 AL359881.1-201ENST00000602916 267 ntBASIC3.54□□□□□ -1.84
NEFMP07197 RPL12P50-201ENST00000603116 116 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3670-4-201ENST00000612260 65 ntBASIC3.54□□□□□ -1.84
NEFMP07197 uc_338.14-201ENST00000613162 166 ntBASIC3.54□□□□□ -1.84
NEFMP07197 MIR3658-201ENST00000636291 56 ntBASIC3.54□□□□□ -1.84
NEFMP07197 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.54□□□□□ -1.84
NEFMP07197 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEFMP07197 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NEFMP07197 SNORD114-7-201ENST00000362520 77 ntBASIC3.53□□□□□ -1.84
NEFMP07197 Y_RNA.353-201ENST00000365440 108 ntBASIC3.53□□□□□ -1.84
NEFMP07197 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-14-201ENST00000383894 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-17-201ENST00000383929 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-15-201ENST00000384445 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SNORD116-19-201ENST00000384729 92 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR586-201ENST00000385035 97 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.53□□□□□ -1.84
NEFMP07197 AL121914.1-201ENST00000450188 156 ntBASIC3.53□□□□□ -1.84
NEFMP07197 RPS27P26-201ENST00000494583 239 ntBASIC3.53□□□□□ -1.84
NEFMP07197 SCARNA8-201ENST00000515924 131 ntBASIC3.53□□□□□ -1.84
NEFMP07197 RNU6-971P-201ENST00000516920 106 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AC079598.5-201ENST00000547460 117 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR4724-201ENST00000579485 89 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR4635-201ENST00000583759 79 ntBASIC3.53□□□□□ -1.84
NEFMP07197 MIR4298-201ENST00000584380 73 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AC006023.1-201ENST00000603944 259 ntBASIC3.53□□□□□ -1.84
NEFMP07197 AC025754.2-201ENST00000606491 432 ntBASIC3.53□□□□□ -1.84
NEFMP07197 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.53□□□□□ -1.84
NEFMP07197 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.53□□□□□ -1.85
NEFMP07197 MIR367-201ENST00000362299 68 ntBASIC3.52□□□□□ -1.85
NEFMP07197 Y_RNA.172-201ENST00000363765 102 ntBASIC3.52□□□□□ -1.85
NEFMP07197 SNORA25.6-201ENST00000364121 118 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-643P-201ENST00000384018 107 ntBASIC3.52□□□□□ -1.85
NEFMP07197 MIR548B-201ENST00000385247 97 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-1228P-201ENST00000391014 107 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC006461.1-201ENST00000412637 326 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.52□□□□□ -1.85
NEFMP07197 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.52□□□□□ -1.85
NEFMP07197 AC245047.8-201ENST00000456455 284 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC112771.1-201ENST00000463581 102 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-1333P-201ENST00000516162 93 ntBASIC3.52□□□□□ -1.85
NEFMP07197 RNU6-453P-201ENST00000516819 85 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC112693.2-201ENST00000556538 232 ntBASIC3.52□□□□□ -1.85
NEFMP07197 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.52□□□□□ -1.85
NEFMP07197 MIR5194-201ENST00000582634 120 ntBASIC3.52□□□□□ -1.85
NEFMP07197 TUG1_4.1-201ENST00000619464 181 ntBASIC3.52□□□□□ -1.85
NEFMP07197 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.52□□□□□ -1.85
NEFMP07197 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.52□□□□□ -1.85
NEFMP07197 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.51□□□□□ -1.85
NEFMP07197 snoU2_19.1-201ENST00000362361 80 ntBASIC3.51□□□□□ -1.85
NEFMP07197 Y_RNA.71-201ENST00000362892 104 ntBASIC3.51□□□□□ -1.85
NEFMP07197 RNA5SP393-201ENST00000363423 117 ntBASIC3.51□□□□□ -1.85
NEFMP07197 Y_RNA.261-201ENST00000364631 102 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms