Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 AC091544.4-201ENST00000555268 342 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 MIR6817-201ENST00000615588 66 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 CENPCP1-201ENST00000533085 2578 ntBASIC2.59□□□□□ -1.99
PCDHGA3Q9Y5H0 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 SNORA25.1-201ENST00000362326 128 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.286-201ENST00000364813 102 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 RNU6-102P-201ENST00000384485 104 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 SNORA67.4-201ENST00000384688 142 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 MIR548H3-201ENST00000408771 118 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 SNORD127-201ENST00000458892 86 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 SERF1AP1-201ENST00000514575 187 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 AC023157.2-201ENST00000540596 141 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 AC078899.2-201ENST00000595282 212 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.15-201ENST00000611544 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.16-201ENST00000613119 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.12-201ENST00000613778 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.9-201ENST00000615427 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.11-201ENST00000616345 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.2-201ENST00000616535 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.3-201ENST00000617785 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.19-201ENST00000618602 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 RNU2-1-201ENST00000618664 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.6-201ENST00000619225 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.5-201ENST00000619465 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 U2.10-201ENST00000620268 191 ntBASIC2.58□□□□□ -2
PCDHGA3Q9Y5H0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 MTND5P6-201ENST00000422338 1798 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 SNORA27.1-201ENST00000362604 124 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.329-201ENST00000365209 107 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.478-201ENST00000384358 107 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.483-201ENST00000384380 101 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 RNA5SP465-201ENST00000391195 109 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 AC060773.1-201ENST00000421698 310 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 RNU6-1132P-201ENST00000459214 107 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 RPL39P38-201ENST00000467018 153 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 DEFB108E-201ENST00000524692 240 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 AC005786.1-201ENST00000588553 154 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 AL512605.2-201ENST00000592972 256 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 AP001282.2-201ENST00000616149 309 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 AL590808.1-201ENST00000618696 141 ntBASIC2.57□□□□□ -2
PCDHGA3Q9Y5H0 SNORD114-6-201ENST00000364393 72 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 MT-TG-201ENST00000387429 68 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 SNORA11.4-201ENST00000408823 129 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 HSPE1P13-201ENST00000451143 297 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 AC104984.5-201ENST00000586878 94 ntBASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA3Q9Y5H0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.237-201ENST00000364439 102 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.352-201ENST00000365439 102 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 RNU6-574P-201ENST00000384265 107 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 AL355796.1-201ENST00000406706 323 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 AC016909.1-201ENST00000415916 166 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 AL121890.1-201ENST00000435457 205 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 RPL23AP7-203ENST00000449021 469 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.14-201ENST00000362415 103 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.350-201ENST00000365409 98 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 HMGN2P39-201ENST00000398005 273 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 RNU2-61P-201ENST00000411069 191 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 HMGN2P34-201ENST00000437647 269 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 RPL23AP3-201ENST00000453844 468 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 RPS27P22-201ENST00000478056 241 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 RNA5SP20-201ENST00000515976 84 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 MIR3169-201ENST00000578032 83 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 AC022202.1-201ENST00000613515 211 ntBASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHGA3Q9Y5H0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms